DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smvt and DUR3

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_011847.1 Gene:DUR3 / 856370 SGDID:S000001008 Length:735 Species:Saccharomyces cerevisiae


Alignment Length:607 Identity:132/607 - (21%)
Similarity:225/607 - (37%) Gaps:190/607 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 FALVLSISAAIGVYFGF----------FAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIM 86
            :|:||.:.|   |:.|.          :.|...|.||:...|:.:||..:|.::|:|.:...:::
Yeast    14 YAIVLGLGA---VFAGMMVLTTYLLKRYQKEIITAEEFTTAGRSVKTGLVAAAVVSSWIWCSTLL 75

  Fly    87 TIPAEMYAYGI--NWVFNV-VCMVLVVPLLNYLVIPVFYNNNITNCYEYLEM---RFCRKVRVLQ 145
            |...:.||.||  .:.:.. .|..::.    :.::.:.......|.:.|||:   |:.:......
Yeast    76 TSSTKEYADGIFGGYAYAAGACFQIIA----FAILAIKTKQMAPNAHTYLELVRTRYGKIGHGCY 136

  Fly   146 TFIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVV-CSI----CVFYTMFGGIKAVVWTDVI 205
            .|..|.|...:..:.:...|..|:.:||     :||:. |.:    .|.||:||||||...||.:
Yeast   137 LFYAIATNILVTSMLLTSGSAVFSDLTG-----MNTIASCFLLPVGVVVYTLFGGIKATFLTDYM 196

  Fly   206 QAAIMVASVVLV---------GVLGAHRVGGFFEVLRIAGEGGRLDINYN---FDLTTRST---- 254
            ...:::. :|||         .|||:  .|..::::|.|.:...:|.||.   ..:|::|.    
Yeast   197 HTCVIII-IVLVFAFKVYATSDVLGS--PGKVYDLVREAAKRHPVDGNYQGEYMTMTSKSAGILL 258

  Fly   255 ----------------IWN--IFTSATMMWTGYV--GLNQSCVQRIVSLPSLGHARRSLVLFGFG 299
                            .||  |..|.......|.  ||....|..::|| ::|.|          
Yeast   259 IINLIGNFGTVFLDNGYWNKAISASPAASLKAYAIGGLAWFAVPSLISL-TMGLA---------- 312

  Fly   300 FILIMFFNCFT-----GIVIYSRFHDCDPI-----QSGHVSKVDKMVPYFVQDTVGNLWGMPGVF 354
                    |..     ....|.     ||:     .||.|.....:.          :.|..|..
Yeast   313 --------CLAVETSPNFPTYP-----DPLTSFQANSGLVLPAAAIA----------IMGKGGAV 354

  Fly   355 IS--CVFSAALSTLSASINSLGGV----VYFDYIKPHIRHTEHRANVIMKLFVFFTGIYCILGGM 413
            .|  .:|.|..|.:||.:.::..|    :|.:||.|       ||:  .|..::.:.:.||..|:
Yeast   355 ASLLMIFMAVTSAMSAELIAVSSVFTYDIYREYIDP-------RAS--GKKLIYTSHVACIFFGL 410

  Fly   414 VIENFNSILQVIYSIGGMSFG---STCGVFMLGMLVP-------KSHGRAALVGVLASIACMATI 468
            .:..|:  :.:.|  ||:|.|   ...|:.:...::|       |...   ||..:.|......:
Yeast   411 AMSGFS--VGLYY--GGISMGYIYEMMGIIISSAVLPVVLTLCSKDMN---LVAAVVSPILGTGL 468

  Fly   469 VILSWGRNHYDTLPTSTSACPASLNGTIKDISTASPLFLGSTTEAPVGEKEFSILDLSFNWY-TV 532
            .|:||            ..|..||                        .||.:: |.:|..| .:
Yeast   469 AIMSW------------LVCTKSL------------------------YKELTV-DTTFMDYPML 496

  Fly   533 TGFVITWL---IGIP-LSYILK 550
            ||.::..|   |.|| |:|:.|
Yeast   497 TGNLVALLSPAIFIPILTYVFK 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 130/603 (22%)
DUR3NP_011847.1 SLC5sbd_DUR3 14..517 CDD:271370 131/604 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I2754
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I1755
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
TreeFam 00.000 Not matched by this tool.
54.860

Return to query results.
Submit another query.