DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and SLC5A4

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:XP_016884409.1 Gene:SLC5A4 / 6527 HGNCID:11039 Length:689 Species:Homo sapiens


Alignment Length:557 Identity:111/557 - (19%)
Similarity:225/557 - (40%) Gaps:101/557 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIMTIPAEMYAYGI-----NWVFN 102
            |...|||..|.|           |...|:..||.||.:.:...:.:.....|.|:     .|..:
Human    83 GTIGGFFLAGRD-----------MAWWPMGASLFASNIGSNHYVGLAGTGAASGVATVTFEWTSS 136

  Fly   103 VVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRVLQTFIFILTMFFMLPIF----IFL 163
            |:.::     |.::.:|::..:.:....|||:.||..:  .||.::.||::|..:.:.    ||.
Human   137 VMLLI-----LGWIFVPIYIKSGVMTMPEYLKKRFGGE--RLQVYLSILSLFICVVLLISADIFA 194

  Fly   164 PSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQAAIM-VASVVLVGVLGAHRVGG 227
            .::......|.:::|...::.::...||..||:.:|::||.:|..|| :.|.:|:| ...:.|||
Human   195 GAIFIKLALGLDLYLAIFILLAMTAVYTTTGGLASVIYTDTLQTIIMLIGSFILMG-FAFNEVGG 258

  Fly   228 -------FFEVLRIAGEGGRLDINYNFDLTTRSTIWNIFTSAT---MMWTGYV-GL--------- 272
                   :........||..|.|:.:. .|.|:..::||..|.   :.|.|.: |:         
Human   259 YESFTEKYVNATPSVVEGDNLTISASC-YTPRADSFHIFRDAVTGDIPWPGIIFGMPITALWYWC 322

  Fly   273 -NQSCVQRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGI---VIYSRF------HDCDPIQSG 327
             ||..|||.:....:.|.:.:.::..:..:|.||.....|:   ::|:..      .:|......
Human   323 TNQVIVQRCLCGKDMSHVKAACIMCAYLKLLPMFLMVMPGMISRILYTDMVACVVPSECVKHCGV 387

  Fly   328 HVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFD-YIKPHIRHTEH 391
            .|...:...|..|.:.:..  |:.|:.:|.:.::.:|:|::..||...:...| |.|...:.:|.
Human   388 DVGCTNYAYPTMVLELMPQ--GLRGLMLSVMLASLMSSLTSIFNSASTLFTIDLYTKMRKQASEK 450

  Fly   392 RANVIMKLFVFFTGIYCILGGMVIE--NFNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAA 454
            ...:..::||....:..|:...:::  ....::....||..........||:|.:...:.:.:.|
Human   451 ELLIAGRIFVLLLTVVSIVWVPLVQVSQNGQLIHYTESISSYLGPPIAAVFVLAIFCKRVNEQGA 515

  Fly   455 LVGVLASIA--CMATIVILSWGRNHYDTLPTSTSACPASLNGTIKDISTASPLFLGSTTEAPVGE 517
            ..|::..:|  .:..|...::|          |.:|.|..|         .|..           
Human   516 FWGLMVGLAMGLIRMITEFAYG----------TGSCLAPSN---------CPKI----------- 550

  Fly   518 KEFSILDLSFNWYTVTGFVITWLIGIPLSYILKSGPD 554
                |..:.:.::::..|..:.|:.:.:|.:.|..||
Human   551 ----ICGVHYLYFSIVLFFGSMLVTLGISLLTKPIPD 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 108/549 (20%)
SLC5A4XP_016884409.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146419
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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