DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and Slc5a2

DIOPT Version :10

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_072112.2 Gene:Slc5a2 / 64522 RGDID:620217 Length:670 Species:Rattus norvegicus


Alignment Length:518 Identity:109/518 - (21%)
Similarity:212/518 - (40%) Gaps:72/518 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 NATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIMTIP 89
            |..|..|.|....:...:|:: ..|.....|...|.:.|:.|...|:..||.||.:.:...:.:.
  Rat    20 NPADILVIAAYFLLVIGVGLW-SMFRTNRGTVGGYFLAGRSMVWWPVGASLFASNIGSGHFVGLA 83

  Fly    90 AEMYAYGI---NWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRF-CRKVR----VLQT 146
            ....|.|:   .:.:|.:.:||   ||.:|.:||:....:....:||..|| .|::|    ||..
  Rat    84 GTGAASGLAVAGFEWNALFVVL---LLGWLFVPVYLTAGVITMPQYLRKRFGGRRIRLYLSVLSL 145

  Fly   147 FIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQAAIMV 211
            |::|.|   .:.:.:|..::...|..|:|::.....:..|.:.||:.||:.|:::||.:|..:::
  Rat   146 FLYIFT---KISVDMFSGAVFIQQALGWNIYASVIALLGITMIYTVTGGLAALMYTDTVQTFVIL 207

  Fly   212 ASVVLVGVLGAHRVGGFFEVL-RIAGEGGRLDI-------------------NYNF--DLTTRST 254
            |...::.....|.|||:..:. :..|....|.:                   :|:.  |..|...
  Rat   208 AGAFILTGYAFHEVGGYSGLFDKYLGAVTSLTVSKDPAVGNISSTCYQPRPDSYHLLRDPVTGDL 272

  Fly   255 IW-NIFTSATMMWTGYVGLNQSCVQRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRF 318
            .| .:....|::...|...:|..|||.::..:|.|.:...:|.|:..::.||.....|::....:
  Rat   273 PWPALLLGLTIVSGWYWCSDQVIVQRCLAGKNLTHIKAGCILCGYLKLMPMFLMVMPGMISRILY 337

  Fly   319 HD---------CDPIQSGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLG 374
            .|         |..:....|...:...|..|...:.|  |:.|:.::.:.:|.:|:|::..||..
  Rat   338 PDEVACVVPEVCKRVCGTEVGCSNIAYPRLVVKLMPN--GLRGLMLAVMLAALMSSLASIFNSSS 400

  Fly   375 GVVYFD-YIKPHIRHTEHRANVIMKLFVFFTGIYCILGGMVIE--NFNSILQVIYSIGGMSFGST 436
            .:...| |.:...|..:....::.:|:|.|.....:....|::  ....:...|.|:........
  Rat   401 TLFTMDIYTRLRPRAGDRELLLVGRLWVVFIVAVSVAWLPVVQAAQGGQLFDYIQSVSSYLAPPV 465

  Fly   437 CGVFMLGMLVPKSHGRAALVGVLASIACMATIVILSWGRNHYDTLP---------TSTSACPA 490
            ..||:|.:.||:.:.:.|..|::..:       ::...|    .:|         ...|||||
  Rat   466 SAVFVLALFVPRVNEKGAFWGLIGGL-------LMGLAR----LIPEFFFGTGSCVRPSACPA 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 108/516 (21%)
Slc5a2NP_072112.2 SLC5-6-like_sbd 22..670 CDD:444915 108/516 (21%)

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