DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and Slc5a4b

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_075708.2 Gene:Slc5a4b / 64454 MGIID:1890478 Length:660 Species:Mus musculus


Alignment Length:630 Identity:141/630 - (22%)
Similarity:259/630 - (41%) Gaps:153/630 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSLLNATVLATAAT----VVPDSQFVFNATDYGVFALVLSISAAIGVYF----------GFFAK 51
            |:|.|:.::  |..|    |||..  :.||.|..|..:...:..|:|::.          |||..
Mouse     1 MASTLSPSI--TPQTEEPPVVPVR--IQNAADISVIVIYFIVVLAVGLWSMVRSNRGTVGGFFLA 61

  Fly    52 GEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIMTIPAEMYAYGI-----NWVFNVVCMVLVVP 111
            |.|           |...|:..||.||.:.:...:.:.....|.||     .|  |.:.||||  
Mouse    62 GHD-----------MAWWPMGASLFASNIGSNHFVGLAGTGAASGIAIAAVEW--NALLMVLV-- 111

  Fly   112 LLNYLVIPVFYNNNITNCYEYLEMRFCRKVRVLQTFIFILTMFFMLPI----FIFLPSLAFAQVT 172
             |.::.:|::....:....|||..||..|  .||.::.:|::|.|:.:    .||..::......
Mouse   112 -LGWVFLPIYIKAGVLTMPEYLRKRFGGK--RLQIYLSVLSLFIMVALQTSSIIFSGAIFIQLAL 173

  Fly   173 GFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQAAIM-VASVVLVGVLGAHRVGG-------FF 229
            |.|::|...::.:|..|||:.||:.:|::||.:|..|| :.|::|:|...| .|||       :.
Mouse   174 GLNLYLAVFILLAITAFYTVAGGLASVIYTDSVQTFIMLLGSLILMGFAFA-EVGGYESFTEKYM 237

  Fly   230 EVLRIAGEGGRLDIN---YNFDLTTRSTIWNIF---TSATMMWTGYV-GL----------NQSCV 277
            ..:....||..|.|:   |    |.:...:::|   .:..:.|.|.: |:          :|..|
Mouse   238 NAIPSVVEGDNLTISPKCY----TPQPDSFHVFRDPVTGDIPWPGLIFGMTILAIWYWCADQVIV 298

  Fly   278 QRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHDCDPIQSGHVSKVDKM------- 335
            ||.:...::.|.:.:.:|.|:..:|.||.....|::  ||....|.:.....|:.:|.       
Mouse   299 QRCLCGKNMSHVKAACILCGYLKLLPMFLMVMPGMI--SRILYTDKVACVVPSECEKQCGTAVGC 361

  Fly   336 ----VPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFD-YIKPHIRHTEHRANV 395
                .|..|.:.:.:  |:.|:.:|.:.::.:|:|::..||...:...| |.|...:.:|....:
Mouse   362 TNYAYPTLVLELMPD--GLRGLMLSVMLASLMSSLTSIFNSASTLFTIDLYTKIRKKASERELMI 424

  Fly   396 IMKLFVFFTGIYCILGGMVIENFNSIL-----------QVIYSIGGMS--FGSTCG-VFMLGMLV 446
            ..::|           |||:... |||           |:.:.||.:|  .|...| ||||.:..
Mouse   425 AGRIF-----------GMVLIAV-SILWVPLVQVSQNGQLFHYIGSVSSYLGPPLGAVFMLAIFF 477

  Fly   447 PKSHGRAALVGVLAS--IACMATIVILSWGRNHYDTLPTSTSACPASLNGTIKDISTASPLFLGS 509
            .:.:.:.|..|::..  :..:..|....:|          |.:|.|..|         .|..   
Mouse   478 KRVNEQGAFWGLMVGLVVGLIRLIAEFVYG----------TGSCVAPSN---------CPKI--- 520

  Fly   510 TTEAPVGEKEFSILDLSFNWYTVTGFVITWLIGIPLSYILKSGPD 554
                        |..:.:.::.:..|.::.::.:.:|::.:..||
Mouse   521 ------------ICGVHYMYFAIILFFVSIIVILGVSFLTEPIPD 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 129/592 (22%)
Slc5a4bNP_075708.2 SLC5-6-like_sbd 27..660 CDD:294310 131/600 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836505
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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