DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and Slc5a4a

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_573447.2 Gene:Slc5a4a / 64452 MGIID:1927848 Length:656 Species:Mus musculus


Alignment Length:624 Identity:128/624 - (20%)
Similarity:245/624 - (39%) Gaps:141/624 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSLLNATVLATAATVVPDSQFVFNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKR 65
            |:|..:.:....::.:...|..:.||.|..|..:...:..|:||: ........|...:.:.|:.
Mouse     1 MASTASVSTSTASSELSSLSNNINNAADISVIVIYFVVVMAVGVW-AMLKTNRSTVGGFFLAGRS 64

  Fly    66 MKTIPIAISLVASQL--------------SAISIMTIPAEMYAYGINWVFNVVCMVLVVPLLNYL 116
            |...|:..||.||.:              |.|::....:..:|           ::||   |.::
Mouse    65 MTWWPMGASLFASNIGSGHFVGLAGTGAASGIAVTAFESHSFA-----------LLLV---LGWI 115

  Fly   117 VIPVFYNNNITNCYEYLEMRFCRKVRVLQTFIFILTMFFMLPIF----IFLPSLAFAQVTGFNVH 177
            .:|::....:....|||:.||..|  .||.::.||.:|..:.:.    ||..::......|.|::
Mouse   116 FVPIYIKAGVMTMPEYLKKRFGGK--RLQIYLSILFLFICVILTISADIFSGAIFIKLALGLNLY 178

  Fly   178 LINTVVCSICVFYTMFGGIKAVVWTDVIQAAIMVASVVLVGVLGAHRVGG-------FFEVLRIA 235
            |...::.:|...:|:.||:.:|::||.:||.||:....::.|.....|||       |...:...
Mouse   179 LAILILLAITAIFTITGGLASVIYTDTVQAVIMLVGSFILMVFAFVEVGGYESFTEKFMNAIPSV 243

  Fly   236 GEGGRLDINYNFDLTTRSTIWNIF---TSATMMWTG-----------YVGLNQSCVQRIVSLPSL 286
            .||..|.||... .|.:...::||   .:..:.|.|           |..:||..|||.:...:|
Mouse   244 VEGDNLTINSRC-YTPQPDSFHIFRDPVTGDIPWPGTAFGMPITALWYWCINQVIVQRCLCGKNL 307

  Fly   287 GHARRSLVLFGFGFILIMFFNCFTGI---VIYSRFHDC-DPIQSGHVSKVD-------------K 334
            .|.:.:.:|.|:..:|.:||....|:   ::|:....| .|.:......||             |
Mouse   308 SHVKAACILCGYLKLLPLFFMVMPGMISRILYTDMVACVVPSECVKHCGVDVGCTNYAYPMLVLK 372

  Fly   335 MVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFD-YIKPHIRHTEHRANVIMK 398
            ::|          .|:.|:.:|.:.::.:|:|::..||...:...| |.|...:.:|....:..:
Mouse   373 LMP----------MGLRGLMLSVMLASLMSSLTSVFNSASTLFTIDLYTKIRKKASERELLIAGR 427

  Fly   399 LFVFFTGIYCILGGMVIENFNSILQVIYSIGGM------SFGSTCG-----VFMLGMLVPKSHGR 452
            |||....:..||...::|         .|.||.      :..|..|     ||::.:...:::.:
Mouse   428 LFVSVLIVTSILWVPIVE---------VSQGGQLVHYTEAISSYLGPPIAAVFLVAVFCKRANEQ 483

  Fly   453 AALVGVLASI--ACMATIVILSWGRNHYDTLPTSTSACPASLNGTIKDISTASPLFLGSTTEAPV 515
            .|..|::..:  ..:..|...|:|....    .:.|:||..:.|                     
Mouse   484 GAFWGLMVGLVMGLIRMIAEFSYGTGSC----LAPSSCPKIICG--------------------- 523

  Fly   516 GEKEFSILDLSFNWYTVTGFVITWLIGIPLSYILKSGPD 554
                     :.:.::.:..|.:..|:.:.:||:.|..||
Mouse   524 ---------VHYLYFAIILFFVCILVILGVSYLTKPIPD 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 119/590 (20%)
Slc5a4aNP_573447.2 SLC5-6-like_sbd 27..656 CDD:294310 123/598 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 574..593
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836504
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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