DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and slc5a6a

DIOPT Version :10

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_001020700.2 Gene:slc5a6a / 563356 ZFINID:ZDB-GENE-041001-177 Length:625 Species:Danio rerio


Alignment Length:559 Identity:184/559 - (32%)
Similarity:303/559 - (54%) Gaps:29/559 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QFVFNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISI 85
            |..|:..||.:|.::|..||.||:|:.|....:.||:|:|:..:.|:.:|:::||:|:..||::|
Zfish     6 QMHFSTVDYVIFVVLLVASAGIGLYYAFSGGRQRTTQEFLLADRSMRCLPVSLSLLATFQSAVAI 70

  Fly    86 MTIPAEMYAYGINWVFNVVC---MVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRVLQTF 147
            :..|:|:|.||..:.| :.|   :.|::|.  ::.|||||...:::.|||||:||.:.||:..|.
Zfish    71 LGAPSEIYTYGTQYWF-LGCSYFLGLLIPA--HIFIPVFYRLRLSSAYEYLELRFSKSVRICGTV 132

  Fly   148 IFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQAAIMVA 212
            .||..|...:.:.::.|:||...||||::......:..:|..||..||:|||:||||.|..:|.|
Zfish   133 TFIFQMVIYMGVVLYAPALALNAVTGFDLWGAVLAMGLVCTLYTALGGLKAVIWTDVFQTIVMFA 197

  Fly   213 SVVLVGVLGAHRVGGFFEVLRIAGEGGRL-DINYNFDLTTRSTIWNIFTSATMMWTGYVGLNQSC 276
            ..:.|.|:|.|:.||..||.|.|..|.|: .::.|.|...|.|.|.:......:.....|:||:.
Zfish   198 GQLAVIVVGTHQAGGIAEVWRKAQNGSRIAGLDLNPDPLERHTFWTLGVGGVFLMLALYGVNQAQ 262

  Fly   277 VQRIVSLPSLGHARRSLVLFGFGFI----LIMFFNCFTGIVIYSRFHDCDPIQSGHVSKVDKMVP 337
            |||.:|    ....:..::..:...    :::...|..|:|:|:|:.:..|:..|:|:..|:||.
Zfish   263 VQRYLS----SRTEKEAIMSCYAVFPCQQVVLTLGCLMGLVMYARYGEESPLDQGYVTTNDQMVL 323

  Fly   338 YFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIKPHI-RHTEHRANVIMKLFV 401
            |.|.|.:.:|.|:||:|::|:||.||||:|::.|||..|...|.||||: ..||.||.::.|:..
Zfish   324 YLVMDVLRDLPGLPGLFVACLFSGALSTISSAFNSLATVTMEDLIKPHVPAMTEARATLLSKMLA 388

  Fly   402 FFTGIYCILGGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAALVGVLASIACMA 466
            ...|:.|:....:.....|:||...||.||..|...|:|.|||..|.::...||||:.:.:....
Zfish   389 LAYGLVCLAMAYIASLMGSVLQAALSIFGMVGGPLLGLFCLGMFFPWANSTGALVGLASGLVMAF 453

  Fly   467 TIVILSWGRNHYDTLPTSTSACPASLNGTI----KDISTASPLFLGSTTEAPVGEKEFSILDLSF 527
            .|.|.|:      ....|.||.|. :|.||    .:::||....|.:|...|.|.:  ::..||:
Zfish   454 WIGIGSF------VSRMSLSALPV-INATIIPDVGNMTTAVMTTLTTTKPRPSGVQ--ALYSLSY 509

  Fly   528 NWYTVTGFVITWLIGIPLSYILKSGPDYKPNPKLLSPVV 566
            .||:........::|:.:|::.....:...||..:.||:
Zfish   510 MWYSAHNSATVVVVGLVVSFLTGPWKEKDLNPGTVYPVL 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 178/533 (33%)
slc5a6aNP_001020700.2 SLC5-6-like_sbd 9..532 CDD:444915 179/538 (33%)

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