DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smvt and slc5a5

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_001082860.1 Gene:slc5a5 / 561445 ZFINID:ZDB-GENE-060503-585 Length:601 Species:Danio rerio


Alignment Length:567 Identity:179/567 - (31%)
Similarity:284/567 - (50%) Gaps:55/567 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FNATDYGVFALVLSISAAIGVYFGF-FAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIMT 87
            |...||.|||.:|.:|..||::... ...|....:.:..||:....:|:.:||.||.:||:.::.
Zfish    11 FCLVDYAVFAAMLGVSVGIGLFQSLRKTPGRSKVDSFFTGGRGFSAVPVGLSLCASFMSAVQVLG 75

  Fly    88 IPAEMYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRVLQTFIFILT 152
            :|:|.|.||..:::..:...|...:...|.:||||...||:..:||.|||.|.:::|.:..||:.
Zfish    76 VPSETYLYGFKFLYMCLGQGLNSLMTAVLFVPVFYRLKITSSSQYLGMRFGRGMQLLGSLQFIVA 140

  Fly   153 MFFMLPIFIFLPSLAFAQVTGFNV--HLINTVVCSICVFYTMFGGIKAVVWTDVIQAAIMVASVV 215
            ......|.||.|::...|.||.|:  .|.:|.:  ||.|||..||:|||:||||.|..:|::..:
Zfish   141 TLLYTGIVIFAPAVILNQATGLNMWASLFSTGL--ICTFYTTVGGMKAVIWTDVFQIVVMLSGFI 203

  Fly   216 LVGVLGAHRVGGFFEVLRIAGEGGRLDIN-YNFDLTTRSTIWNIFTSATMMWTGYVGLNQSCVQR 279
            .|.:.|....||...||.||..|.|::.| :..|...|.:.|:.....||:|....|.||:.|||
Zfish   204 AVFIQGTILAGGPARVLEIANNGSRINFNDFAIDPQRRYSFWSFTVGGTMVWLSMYGANQAQVQR 268

  Fly   280 IVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHDCDPIQSGHVSKVDKMVPYFVQDTV 344
            .:|..:...|:.:|::...|..||:......|||:::.:.:|||::.|.:|..|:.:||.|.|..
Zfish   269 YISCRTEKQAQLALLVNQVGLCLIVSSAATCGIVMFALYSNCDPLKIGRISAPDQYMPYLVLDIF 333

  Fly   345 GNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIKPHIRHTEHRANVIM-KLFVFFTGIYC 408
            .|..|.||:|::|.:|..|||:|.|||::..|...|.:||.:.....|..::: :....|.|:.|
Zfish   334 RNHPGFPGLFLACAYSGTLSTVSTSINAMAAVTMEDVMKPWLITISQRKQLMLSRALSLFYGLGC 398

  Fly   409 ILGGMVIENFN-SILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAALVGVLASIACMATIVILS 472
            |....:....: .:||..:::.|:..|...|.|.|||.||.::......||.... |::  :.|:
Zfish   399 ITMAALSSLLDWGVLQGSFTVMGVVNGPLLGAFALGMFVPATNKPGVFSGVAVGF-CLS--LWLA 460

  Fly   473 WGRNHY-------DTLPTSTSAC---PASLNGTIKDISTASPLFLGSTTEAPVGEKEFSILDLSF 527
            .|...|       ..||||...|   .|:||.|...::::.|                  ||.||
Zfish   461 VGSTIYPPSPQIMGVLPTSAGQCLTTNATLNTTASVLASSVP------------------LDYSF 507

  Fly   528 -NWYTV---------TGFVITWLIGIPLSYILKSGPDYKP--NPKLL 562
             |.|::         |..|:  |:|:.:|||  :||..|.  :|.||
Zfish   508 QNIYSISYLYFGALSTSAVV--LVGVVVSYI--TGPTKKDSISPGLL 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 170/546 (31%)
slc5a5NP_001082860.1 SLC5-6-like_sbd 14..549 CDD:320982 176/561 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580007
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1180002at2759
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR42985
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.950

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