DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smvt and Slc5a3

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_059087.2 Gene:Slc5a3 / 53881 MGIID:1858226 Length:718 Species:Mus musculus


Alignment Length:538 Identity:118/538 - (21%)
Similarity:222/538 - (41%) Gaps:76/538 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VFNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIMT 87
            |..|.|..|.||...:...|| :|..:.....|...|.:.|:.|..:.|..||..|.:.:...:.
Mouse     4 VLEAADIAVVALYFILVMCIG-FFAMWKSNRSTVSGYFLAGRSMTWVAIGASLFVSNIGSEHFIG 67

  Fly    88 I----PAEMYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRF-CRKVRV-LQT 146
            :    .|..:|.|. |.||.   :|::.||.::.||::..:.:....|||..|| ..:::| ...
Mouse    68 LAGSGAASGFAVGA-WEFNA---LLLLQLLGWVFIPIYIRSGVYTMPEYLSKRFGGHRIQVYFAA 128

  Fly   147 FIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQAAIMV 211
            ...:|.:|..|.:.::..:|...:..|:|:::...::..:....|:.||:.||::||.:||.:|:
Mouse   129 LSLLLYIFTKLSVDLYSGALFIQESLGWNLYVSVILLIGMTALLTVTGGLVAVIYTDTLQALLMI 193

  Fly   212 ASVVLVGVLGAHRVGGFFEVLR----IAGEGGRLDINYNFDLTTRSTIWNIFTSATMM------- 265
            ...:.:.|:...::|||.||.|    .:.:...:.:.||...|....:.....:..|:       
Mouse   194 IGALTLMVISMVKIGGFEEVKRRYMLASPDVASILLKYNLSNTNACMVHPKANALKMLRDPTDED 258

  Fly   266 --WTGYV-----------GLNQSCVQRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSR 317
              |.|::           ..:|..|||:::..::.||:.|.::.||..:|.||.....|::....
Mouse   259 VPWPGFILGQTPASVWYWCADQVIVQRVLAAKNIAHAKGSTLMAGFLKLLPMFIIVVPGMISRIV 323

  Fly   318 FHD---------CDPIQSGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSL 373
            |.|         |..:........:...|..|...|.  .|:.|:.::.:.:|.:|.|.:..||.
Mouse   324 FADEIACINPEHCMQVCGSRAGCSNIAYPRLVMTLVP--VGLRGLMMAVMIAALMSDLDSIFNSA 386

  Fly   374 GGVVYFDYIKPHIRHTEHRANVIM-KLFVFFTGIYCILGGMVIENFNSILQVIYSIGGMSF---- 433
            ..:...|..|...:....|..:|: ::||.|         ||:.:...:..::...||..:    
Mouse   387 STIFTLDVYKLIRKSASSRELMIVGRIFVAF---------MVVISIAWVPIIVEMQGGQMYLYIQ 442

  Fly   434 -------GSTCGVFMLGMLVPKSHGRAALVGVLASIACMATIVILSWGRNHYDTLPTSTSACPAS 491
                   .....:|:|.:...:.:.:.|..|.:|.....|..:||::      |........|.:
Mouse   443 EVADYLTPPVAALFLLAIFWKRCNEQGAFYGGMAGFVLGAVRLILAF------TYRAPECDQPDN 501

  Fly   492 LNGTIKDIS---TASPLF 506
            ..|.||||.   .|:.||
Mouse   502 RPGFIKDIHYMYVATALF 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 116/534 (22%)
Slc5a3NP_059087.2 SLC5sbd_SMIT 9..718 CDD:271382 116/533 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836493
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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