DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and Slc5a8

DIOPT Version :10

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_001178916.1 Gene:Slc5a8 / 500820 RGDID:1564146 Length:611 Species:Rattus norvegicus


Alignment Length:611 Identity:228/611 - (37%)
Similarity:324/611 - (53%) Gaps:64/611 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIMTI 88
            |...||.|||.:|.||||||:|:.|...|:.|::::||||:.|..:|:|:||.||.:||::::..
  Rat    10 FVVWDYVVFAGMLLISAAIGIYYAFAGGGQQTSKDFLMGGRSMSAVPVALSLTASFMSAVTVLGT 74

  Fly    89 PAEMYAYGINWVFNV--VCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRVLQTFIFIL 151
            |||:|.:|.  :|::  |....||.:...:.:||||...||:.|||||:||.|.:|:..|.:||:
  Rat    75 PAEVYRFGA--IFSIFGVTYFFVVVISAEVFLPVFYRLGITSTYEYLELRFNRFIRLCGTVLFIV 137

  Fly   152 TMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCS--ICVFYTMFGGIKAVVWTDVIQAAIMVASV 214
            .......|.|:.|:||..|||||:  |...||.:  :|.||...||:||||||||.|..||||..
  Rat   138 QTILYTGIVIYAPALALNQVTGFD--LWGAVVATGVVCTFYCTLGGLKAVVWTDVFQVGIMVAGF 200

  Fly   215 VLVGVLGAHRVGGFFEVLRIAGEGGRLDI-NYNFDLTTRSTIWNIFTSATMMWTGYVGLNQSCVQ 278
            ..|.:..:...||...:|..|..||||:. |:|.:...|.|.|.|....|..||...|:|||.||
  Rat   201 ASVIIQASITQGGINTILSDASNGGRLNFWNFNPNPLQRHTFWTIIVGGTFTWTTIYGVNQSQVQ 265

  Fly   279 RIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHDCDPIQSGHVSKVDKMVPYFVQDT 343
            |.:|..|..||:.||.:...|..:|:..:.|.|:.:|||:|||||..|..||:||:::||.|.|.
  Rat   266 RYISCKSRLHAKLSLYVNLVGLWVILICSVFCGLALYSRYHDCDPWTSKKVSEVDQLMPYLVLDI 330

  Fly   344 VGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIKPHIRH-TEHRANVIMKLFVFFTGIY 407
            :.|..|:||:|::|.:|..|||:|:|||:|..|...|.|||..:. :|...:.|.:......|..
  Rat   331 LKNYPGVPGLFVACAYSGTLSTVSSSINALAAVTVEDLIKPRFKSLSEKSLSWISQGMSVLYGAL 395

  Fly   408 CILGGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAALVGVLASIACMATIVILS 472
            ||....|.....::||...||.||..|...|:|.||:|||.::...|..|:||..|....:.|  
  Rat   396 CIGMAAVASLMGALLQAALSIFGMVGGPLLGLFSLGILVPFANSVGAFAGLLAGFAVSLWVGI-- 458

  Fly   473 WGRNHYD-----TLPTS--TSACPASLNGTIKDISTASPLFLGSTTEAPVGEKEFSILD-----L 525
             |...|.     |||.|  |..|.::.|||  |..        ||||.|.....|.|.|     |
  Rat   459 -GAQLYPPLPERTLPLSLETHGCNSTHNGT--DWM--------STTEMPFSTSAFQIHDVERSAL 512

  Fly   526 SFNWYTVT-------GFVITWLIGIPLSYILKSGPDYKPNPKLLSPVVQPF-------------V 570
            ..|||:::       |.:.|.|:||.:| :...|.....:|:.|. ..|.|             :
  Rat   513 MDNWYSLSYLYFSTIGTLTTLLVGILIS-LATGGRKQNLDPRFLL-TKQDFLSNFDVFKKKTHVL 575

  Fly   571 HYKLTP-----SDEP--HQLNLEKPE 589
            :||:.|     :|.|  :.:.|..|:
  Rat   576 NYKMHPVEDGGTDNPAFNHVELNFPD 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 215/545 (39%)
Slc5a8NP_001178916.1 SLC5sbd_SMCT1 7..549 CDD:271402 217/556 (39%)

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