DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and slc5a11

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_001007301.1 Gene:slc5a11 / 492334 ZFINID:ZDB-GENE-041114-9 Length:668 Species:Danio rerio


Alignment Length:630 Identity:138/630 - (21%)
Similarity:257/630 - (40%) Gaps:158/630 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 AATVVPDS-----------QFVFNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRM 66
            |||..||:           |.....||..|..:...:..|:|::..:..| ..|.:.|.:.||.|
Zfish     2 AATEAPDASPTPTSDGTAQQTTLATTDIVVLVIYFLLVLAVGLWSMWKTK-RSTVDGYFLAGKNM 65

  Fly    67 KTIPIAISLVASQLSAISIMTIPAEMYAYGINWV---FNVVCMVLVVPLLNYLVIPVFYNNNITN 128
            ...|:..||.||.:.:...:.:.....|.||..|   :|.:.||||   :.:|.:|::..:.:|.
Zfish    66 TWWPVGASLFASNVGSGHFIGLAGSGAAAGIGAVAYEWNGMLMVLV---MGWLFLPIYIASRVTT 127

  Fly   129 CYEYLEMRFCRK-----VRVLQTFIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICV 188
            ..|||:.||..|     :.||..||:|.|   .:.:.::..::...|...:|::|...::..|..
Zfish   128 MPEYLKKRFGGKRIQLFLCVLYLFIYIFT---KISVDMYAGAVFIQQALQWNIYLAVVLLLGITA 189

  Fly   189 FYTMFGGIKAVVWTDVIQAAIMV-ASVVLVGVLGAHRVGGFFEVL----------RIAGEGGRLD 242
            .||:.||:.||::||.:|..||| .:::|:|...| .||||..||          |:..      
Zfish   190 LYTIAGGLAAVIYTDAVQTIIMVIGALILMGFSFA-EVGGFEAVLDKYPQAIPSIRVPN------ 247

  Fly   243 INYNFDLTT----RSTIWNIF---TSATMMWTGYV-GL----------NQSCVQRIVSLPSLGHA 289
                   ||    |...::||   .::.:.|.|.: |:          :|..|||.::..::.||
Zfish   248 -------TTCGIPRDDAFHIFRHPVTSDLPWPGVILGMSIPSMWYWCSDQVIVQRSLAAKNILHA 305

  Fly   290 RRSLVLFGFGFILIMFFNCFTGIVIYSRFHDCDPIQSGHVSKVDKMVPYFVQDTVGNL------- 347
            :...:|..:..:|..|.....|::  ||....|.:..|.        |...::..||.       
Zfish   306 KGGSLLAAYIKVLPFFMMVIPGMI--SRILYPDEVGCGD--------PEVCKEVCGNSVGCSDIA 360

  Fly   348 ----------WGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIKPHIRHT--EHRANVIMKLF 400
                      .|:.|:.::.:.:|.:|:|::..||...:...|..: :||||  |....::.::|
Zfish   361 YAKLVMELLPAGLRGLMMAVMLAALMSSLTSIFNSSSTIFTMDLWR-NIRHTASEWELMIVGRVF 424

  Fly   401 VFFTGIYCIL---------GGMV---IENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRA 453
            |....:..:|         ||.:   |::.:..||...::          :|:.|....:::.:.
Zfish   425 VLVLVVVSVLWIPLVQASQGGQLFIYIQSISMYLQPPITV----------IFVAGCFWKRTNEKG 479

  Fly   454 ALVGVLASIACMATIVILSWGRNHYDTLPTSTSACPASLNGTIKDISTASPLFLGSTTEAPVGEK 518
            |..|::..:|...|.:||                          |....:|....|.|...:   
Zfish   480 AFWGLMVGMAVGCTRMIL--------------------------DFIYPTPQCYESDTRPDI--- 515

  Fly   519 EFSILDLSFNWYTVTGFVITWLIGIPLSYILKSGPDYKPNPKLLS 563
               |..:.|.::::...::|.::.:.:|...:     ||.|:.:|
Zfish   516 ---IKYVHFLYFSIILTILTLVVVVCVSLATE-----KPKPEQIS 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 128/588 (22%)
slc5a11NP_001007301.1 SLC5sbd_SGLT6 28..668 CDD:271381 131/604 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580040
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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