DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smvt and LOC4576984

DIOPT Version :10

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:XP_001238431.3 Gene:LOC4576984 / 4576984 VectorBaseID:AGAMI1_003923 Length:634 Species:Anopheles gambiae


Alignment Length:584 Identity:190/584 - (32%)
Similarity:331/584 - (56%) Gaps:45/584 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FNATDYGVFALVLSISAAIGVYFGF-----------FAKGEDTTEEYLMGGKRMKTIPIAISLVA 77
            |:..||.||.|:|.|...||::||:           .|:.|....:||:||::|:..|:::||||
Mosquito    43 FDWPDYVVFVLMLLICIVIGIFFGYKDHQKHKHRRKQARRESEALDYLVGGRKMQIFPVSVSLVA 107

  Fly    78 SQLSAISIMTIPAEMYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVR 142
            |.:|.||::....|:|.||..:.:.|..::::..:::::.:|||:...||:.||||:.||..::|
Mosquito   108 SWISGISLLGTSTEIYVYGTQYCYIVFAVIMMGFVMHHVFLPVFHELQITSAYEYLQRRFDHRMR 172

  Fly   143 VLQTFIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQA 207
            :..:.:|.:.....:||.|::|:|||.||||.::|::..:||.||||||..||:||||||||||:
Mosquito   173 LFGSILFTVACLLWMPIVIYVPALAFNQVTGMSIHIVTPIVCMICVFYTSIGGLKAVVWTDVIQS 237

  Fly   208 AIMVASVVLVGVLGAHRVGGFFEVLRIAGEGGRLDIN-YNFDLTTRSTIWNIFTSATMMWTGYVG 271
            .:.:.:::.|.:.|.:.|||..||::....||||:.. ::.|.|.|.:||.|...|.:.:...|.
Mosquito   238 GVTLLALLAVLIKGTYDVGGPAEVVQRNIAGGRLEAPIFDPDPTLRHSIWIILLGAPVWFCYGVS 302

  Fly   272 LNQSCVQRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHDCDPIQSGHVSKVDKMV 336
            .:|..:||.::||:|..||::|..|..|:|::.......|:::|:.::.|||:.:......|:::
Mosquito   303 CSQDMIQRFLALPTLQDARKALKGFVIGWIVVNVIFFLIGMLVYATYYRCDPLTTQLARAKDQLL 367

  Fly   337 PYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIKPHIRH--TEHRANVIMKL 399
            |.||.:|.....||.|||::.:||||||:||:::|:|..:...|:.||:.:.  ||.:.|.||:.
Mosquito   368 PLFVMETFAAYPGMTGVFVAGIFSAALSSLSSALNALSAITLEDFFKPYCKKPLTEKQINYIMRG 432

  Fly   400 FVFFTGIYCILGGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAALVGVLASI-- 462
            .|...|...:|..:::|:..:::|:..::...|.....|:|::|:|:|..:|..||.|.:..:  
Mosquito   433 SVLVYGALSVLLSILVEHLGTVMQLTMTLSSASGAPLFGLFVMGILMPWVNGTGALYGGVTGLLV 497

  Fly   463 ---ACMATIVILSWGRNHYDTLPTSTSACPASLN-----GTIKDISTASPLFLGSTTEAPVGEKE 519
               .|......::.|...:||.|.|...||....     |.|:|             :|.:.:.|
Mosquito   498 MLYMCYKAQYSIASGSRSFDTKPVSVEDCPYDYGRNATMGLIED-------------DAELEQLE 549

  Fly   520 FSILDLSFNWYTVTGFVITWLIGIPLSYILK---SGPDYKPNPKLLSPVVQPFVHYKLTPSDEP 580
            .||..:|:.::|:.|..:|.|.|..:|.:.|   |..|...:||||:|.::     ::.|.|.|
Mosquito   550 KSIYHMSYMYFTLFGTSVTCLTGTVVSLLTKLCGSDRDQPIDPKLLAPCIR-----RIQPRDIP 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 178/544 (33%)
LOC4576984XP_001238431.3 None

Return to query results.
Submit another query.