DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and slc5a6

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:XP_031757499.1 Gene:slc5a6 / 448188 XenbaseID:XB-GENE-5737332 Length:638 Species:Xenopus tropicalis


Alignment Length:608 Identity:190/608 - (31%)
Similarity:306/608 - (50%) Gaps:57/608 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIMTI 88
            |...||.:|.|:|.:|:|||:|:......:.|.:|:|:..:.|..:||::||:|:..||::|:.:
 Frog     3 FTTVDYIIFVLLLVLSSAIGLYYALSGGKQRTMQEFLLANRSMSFLPISLSLLATFQSAVAILGV 67

  Fly    89 PAEMYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRVLQTFIFILTM 153
            |:|:|.:|..:.|.....::.:.:..::.|||||...:|:.|||||:||.:.||:..|..||..|
 Frog    68 PSEIYRFGTEYWFLGCSYIIGLLIPAHIFIPVFYRLRLTSTYEYLELRFSKAVRICGTVTFIFQM 132

  Fly   154 FFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQAAIMVASVVLVG 218
            ...:.:.::.|:|||..||||::......:..:|..||..||:|||:||||||..:|.|..:.|.
 Frog   133 VIYMGVVLYAPALAFNAVTGFSLWGAVLSMGLVCTLYTTLGGLKAVIWTDVIQTLVMFAGQLAVI 197

  Fly   219 VLGAHRVGGFFEVLRIAGEGGRL-DINYNFDLTTRSTIWNIFTSATMMWTGYVGLNQSCVQRIVS 282
            ::|..:||||.:|..||.|..:: .:|:|.|...|.:.|::......|.....|:||:.|||.:|
 Frog   198 IVGTIKVGGFDQVWNIATENNKIAGVNWNPDPFERHSFWSLAIGGIFMMLSLYGVNQAQVQRYLS 262

  Fly   283 LPSLGHARRSLVLFGFGFI----LIMFFNCFTGIVIYSRFHDCDPIQSGHVSKVDKMVPYFVQDT 343
                ....:..:|..:...    |::...|.||:|:::.:..........:|..|:||.|||.|.
 Frog   263 ----SRTEKEAILSCYAVFPCQQLVLALGCLTGLVMFAYYKINPSAYPQDISVPDQMVLYFVMDI 323

  Fly   344 VGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIKPHIRH-TEHRANVIMKLFVFFTGIY 407
            :.:|.|:||:|::|:||.||||:|::.|||..|...|.||||... ||.:|..:.|......|:.
 Frog   324 LKDLPGLPGLFVACLFSGALSTISSAFNSLATVTMQDLIKPHFPSLTESQATWLSKGLALGYGLL 388

  Fly   408 CILGGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAALVGVLASIACMATIVILS 472
            |:....:.....|:||...||.||..|...|:|.||...|.::...|:.|:.|.      :|:..
 Frog   389 CLGMAYISSLMGSVLQAALSIFGMVGGPLLGLFCLGFFFPFTNSIGAMSGLAAG------LVMAF 447

  Fly   473 W-GRNHYDTLPTSTSACPASLNGT-IKDISTASPLFLGSTTEAPVGEKEFSIL----DLSFNWYT 531
            | |...:.|...|... |..||.| :.|....:...:.:...:|..:|..|.|    .||:.||:
 Frog   448 WIGIGSFVTRMPSVPP-PPLLNATSVPDFGNLTTTVMSTLLTSPTAKKSVSGLQKFYSLSYMWYS 511

  Fly   532 VTGFVITWLIGIPLSYILKSGP----DYKPN------PKLLSPVVQPF---VHYKL--------- 574
            ........::|:.:|  |.:||    |..|.      ||||..:.:.:   :.|.:         
 Frog   512 AHNSTTVVIVGLIVS--LLTGPTKGRDIDPRTVYLVLPKLLFFLPERYREKLRYGVPHIVEVGDC 574

  Fly   575 -------TPSDE---PHQLNLEK 587
                   .|.||   ||.|..||
 Frog   575 LSPRLLQVPYDEHSPPHDLVTEK 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 171/532 (32%)
slc5a6XP_031757499.1 SLC5-6-like_sbd 3..530 CDD:382020 173/539 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489472at33208
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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