DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and CG42235

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_651446.2 Gene:CG42235 / 43136 FlyBaseID:FBgn0250757 Length:698 Species:Drosophila melanogaster


Alignment Length:610 Identity:194/610 - (31%)
Similarity:319/610 - (52%) Gaps:65/610 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FNATDYGVFALVLSISAAIGVYFGFFAK--------GED-----TTEE--------YLMGGKRMK 67
            |...||.||..:|::.|.||.||||..|        |:|     ..||        ||:||::||
  Fly   102 FGIVDYLVFIAMLAVCAVIGFYFGFIEKKQKKQKLAGKDGGGAAGVEERRGSEALDYLVGGRQMK 166

  Fly    68 TIPIAISLVASQLSAISIMTIPAEMYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEY 132
            ..|:|:|||||.:|.||::....|:|.||..:.|.:|.:.:...:..|:.:|||.|..:|:.|||
  Fly   167 VFPVALSLVASFVSGISLLGTSTEIYVYGTQYAFILVTLAISGAISWYIFLPVFCNLQLTSTYEY 231

  Fly   133 LEMRFCRKVRVLQTFIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIK 197
            .|.||.|:||:..:.:|::......||.|::|:|...||:|.:|..|..|...||:.||..||||
  Fly   232 FERRFDRRVRIFGSCLFVVMNILWQPICIYVPALTLNQVSGISVSKIVPVTSFICILYTSVGGIK 296

  Fly   198 AVVWTDVIQAAIMVASVVLVGVLGAHRVGGFFEVL-------RIAGEGGRLDINYNFDLTTRSTI 255
            .||||||||..:|:.|:::|.:.|...:||...||       |:.|.      :..||.|.|..:
  Fly   297 GVVWTDVIQGTVMIGSMLIVIIKGTLDLGGLSVVLDHNRQYDRLVGP------DMTFDPTARMGV 355

  Fly   256 WNIFTSATMMWTGYVGLNQSCVQRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHD 320
            :.:|....:......|:||:.|||.::||:....:::|||...||:.:|....:.|::.::.|:.
  Fly   356 FALFVGGALFKLQANGINQAIVQRYLTLPNNKDVKKALVLSLIGFMFVMLMCVYIGLLAFAEFYH 420

  Fly   321 CDPIQSGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIKPH 385
            ||||.:|.....|:::|.:|...||::.|:.|:|::.|||||||:||.::|||.||:..|:::|.
  Fly   421 CDPITTGLARAKDQVIPLYVVKNVGHIPGLVGLFVAGVFSAALSSLSTALNSLSGVILTDFVEPF 485

  Fly   386 IRH--TEHRANVIMKLFVFFTGIYCILGGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPK 448
            .:.  ||.:...:::..|...|:..:....:::....::|:..::..::.|...|.|.:|||:|.
  Fly   486 RKKPLTERQTAYLLRGVVISFGLISMASVPIVQRLGLVMQLSSTVAAITCGPLLGAFSVGMLLPF 550

  Fly   449 SHGRAALVGVLASIACMATIVI-----LSWGRNHYDTLPTSTSAC------PASLNGTIKDISTA 502
            ....:.|.|:..:.:..|.||:     :..|...:...|.|...|      ||:.|.|       
  Fly   551 VKTESLLTGISCASSFTAYIVVRAQIAIFTGSLTFPAKPVSIQDCDYTFDLPANWNAT------- 608

  Fly   503 SPLFLGSTTEAPVGEKEFSILDLSFNWYTVTGFVITWLIGIPLSYILKSGPDYK-PNPKLLSPVV 566
                   ||..|.......|.::||.|||..|.|.| ::|..|:.:.....|.: .:.:|:|||:
  Fly   609 -------TTATPTESTSHGIHEISFLWYTAVGSVGT-VLGSLLATLYFGRQDPRVVDKELISPVL 665

  Fly   567 QPFVH--YKLTPSDEPHQLNLEKPE 589
            :.|.:  |:...|:|.:..||.:.|
  Fly   666 RKFWYGKYESVASEEKNNFNLHESE 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 181/561 (32%)
CG42235NP_651446.2 SLC5sbd_NIS-SMVT 105..646 CDD:271383 181/561 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448236
Domainoid 1 1.000 74 1.000 Domainoid score I2508
eggNOG 1 0.900 - - E1_COG0591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 102 1.000 Inparanoid score I307
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1180002at2759
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 1 1.000 - - mtm9745
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42985
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
109.900

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