DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and ChT

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster


Alignment Length:531 Identity:100/531 - (18%)
Similarity:191/531 - (35%) Gaps:141/531 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 GVFALVL--SISAAIGVYFGFFAK-GEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIMTIPAE 91
            ||.::||  .:...:|::.|...: |.|:.||.::.|:.:.......::.|:.:....|......
  Fly     6 GVVSIVLFYLLILVVGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGTAEA 70

  Fly    92 MYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRVLQTFIFILTMFFM 156
            :|..|:.|     |.......|:.:...:|:.|.:            ||    |.:|.:|.    
  Fly    71 IYTSGLVW-----CQAPFGYALSLVFGGIFFANPM------------RK----QGYITMLD---- 110

  Fly   157 LPI----------FIFLPSL--------AFAQVTGFNVHLI------NTVVCSIC--VFYTMFGG 195
             |:          .:|||:|        ......|..:.:|      .:|:.|.|  :|||:|||
  Fly   111 -PLQDSFGERMGGLLFLPALCGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGG 174

  Fly   196 IKAVVWTDVIQA-AIMVASVVLVGVLGAHRVGGFFEVLRIAGEG------GRLDINYNFDLTTRS 253
            :.:|.:|||||. .|.:...:.:....::...|....|.:...|      ..|.|:|...|....
  Fly   175 LYSVAYTDVIQLFCIFIGLWMCIPFAWSNEHVGSLSDLEVDWIGHVEPKKHWLYIDYGLLLVFGG 239

  Fly   254 TIWNIFTSATMMWTGYVGLNQSCVQRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSR- 317
            ..|.::                 .||::|..:.|.|:....:...|.||:.......|.:..:. 
  Fly   240 IPWQVY-----------------FQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAIAKATP 287

  Fly   318 FHDCD-----PIQSGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGGVV 377
            :::.|     |:.....|.:..||..::.....:.:|:..|..:.:.||..|.|||: :.....|
  Fly   288 WNETDYKGPYPLTVDETSMILPMVLQYLTPDFVSFFGLGAVSAAVMSSADSSVLSAA-SMFARNV 351

  Fly   378 YFDYIKPHIRHTEHRANVI--MKLFVFFTGIYCILGGMVIEN----------------FNSILQV 424
            |    |...|.......:|  |::.:...||...:..:.|.:                |..:|.|
  Fly   352 Y----KLIFRQKASEMEIIWVMRVAIIVVGILATIMALTIPSIYGLWSMCSDLVYVILFPQLLMV 412

  Fly   425 IY------SIGGMSFGSTCGVFMLGMLVPKSHGRAAL---------------------VGVLASI 462
            ::      :.|.:|      .:::.:.:..|.|.|.|                     ...:|.:
  Fly   413 VHFKKHCNTYGSLS------AYIVALAIRLSGGEAILGLAPLIKYPGYDEETKEQMFPFRTMAML 471

  Fly   463 ACMATIVILSW 473
            ..:.|::.:||
  Fly   472 LSLVTLISVSW 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 100/531 (19%)
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 97/527 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448240
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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