DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and slc5a8

DIOPT Version :10

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_001351880.1 Gene:slc5a8 / 394505 XenbaseID:XB-GENE-479634 Length:620 Species:Xenopus tropicalis


Alignment Length:563 Identity:197/563 - (34%)
Similarity:300/563 - (53%) Gaps:47/563 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VVPDSQFVFNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQL 80
            |.|.:...|...||.||||:|.|||.||:|:.|...|:.|::::||||:.|..:|:|:||.||.:
 Frog     2 VTPGNIGSFTVWDYVVFALMLLISAVIGIYYAFAGGGQKTSKDFLMGGRSMTAVPVALSLTASFM 66

  Fly    81 SAISIMTIPAEMYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRVLQ 145
            ||::::..|||:|.:|..:........:||.:.:.:.:||||...||:.|||||:||.:.||:|.
 Frog    67 SAVTVLGTPAEVYRFGSMFSIFAFTYAIVVVISSEVFLPVFYRLGITSTYEYLELRFNKFVRLLG 131

  Fly   146 TFIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCS--ICVFYTMFGGIKAVVWTDVIQAA 208
            |.:||:.......|.|:.|:||..|||||:  |...||.:  :|.||...||:||||||||.|..
 Frog   132 TILFIIQTVLYTGIVIYAPALALNQVTGFD--LWGAVVATGVVCTFYCTMGGLKAVVWTDVFQVG 194

  Fly   209 IMVA---SVVLVGVLGAHRVGGFFEVLRIAGEGGRLDINYNFDLT----TRSTIWNIFTSATMMW 266
            ||||   ||::..|:..   ||...:|..:..|.||:.   :|.|    .|.:.|.|....|..|
 Frog   195 IMVAGFSSVIIRAVVVQ---GGIGPILNDSYYGDRLNF---WDFTPNPLQRHSFWTIVVGGTFTW 253

  Fly   267 TGYVGLNQSCVQRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHDCDPIQSGHVSK 331
            ||..|:|||.|||.::..:...|:.||.:...|...|:.....:|:.:||.:.||||..:..||.
 Frog   254 TGIYGVNQSQVQRYIACKTRFQAKLSLYINLLGLWAILACAVLSGLAMYSIYKDCDPWTAQFVSA 318

  Fly   332 VDKMVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIKPHIRH-TEHRANV 395
            .|:::||...|.:.:..|:||:|:||.:|..|||:|:|||:|..|...|.|||:.|. :|.:.:.
 Frog   319 PDQLMPYLSLDILRDYPGLPGLFVSCAYSGTLSTVSSSINALAAVTVEDLIKPYFRSLSETKMSW 383

  Fly   396 IMKLFVFFTGIYCILGGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAALVGVLA 460
            |.|......|..||....:......:||...||.||..|...|:|.||::.|..:...|::|:|:
 Frog   384 ISKGTSLIYGAICIAMAGLASLMGGLLQAALSIFGMVGGPLLGLFALGIIFPFVNSLGAVIGLLS 448

  Fly   461 SIACMATIVILSWGRNHYDTLPTSTSACPASL------------NGTIKDISTASPLFLGSTTEA 513
            ..|....:.|   |...|.  ||::|:.|..|            |.|    :|..|:.   ||..
 Frog   449 GFAISLWVGI---GSQIYP--PTASSSLPKPLSLEGCNFTSFESNWT----TTVMPMM---TTLI 501

  Fly   514 PVGEKEFSILD----LSFNWYTVTGFVITWLIGIPLSYILKSG 552
            |.......:.|    ||:.:::..|.::..::|: ::.:|..|
 Frog   502 PEVSSRPELADSWYSLSYLYFSTLGTIVAVVVGV-IASLLSGG 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 192/546 (35%)
slc5a8NP_001351880.1 SLC5sbd_SMCT1 7..547 CDD:271402 195/558 (35%)

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