DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smvt and slc5a1

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_956975.1 Gene:slc5a1 / 393654 ZFINID:ZDB-GENE-040426-1524 Length:658 Species:Danio rerio


Alignment Length:512 Identity:122/512 - (23%)
Similarity:216/512 - (42%) Gaps:52/512 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FVFNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIM 86
            :|.|..|..|..:...:..|:||: ........|...:.:.|:.|...||..||.||.:.:...:
Zfish    22 YVNNPADISVIVIYFLVVLAVGVW-AMVRTNRATVGGFFLAGRSMVWWPIGASLFASNIGSGHFV 85

  Fly    87 TIPAEMYAYGI---NWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRF-CRKVRV-LQT 146
            .|.....|.||   .:.:|.:.:|::   |.:|.:|::....:....|||:.|| .:::|: |..
Zfish    86 GIAGTGAAAGIAIGGFEWNALVVVII---LGWLFVPIYIKAGVVTMPEYLKKRFGGQRIRIYLSV 147

  Fly   147 FIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQAAIM- 210
            ....|.:|..:...:|..::...|..|.|::|...::..|...||:.||:.||::||.:|..|| 
Zfish   148 LSLCLYVFTKISADMFAGAIFINQALGLNIYLAVVILLLITALYTVTGGLAAVIYTDTLQTIIMV 212

  Fly   211 VASVVLVGVLGAHRVGGF--FEVLRIAGEGGRLDINYNFD-LTTRSTIWNIF---TSATMMWTGY 269
            |.|.:|:| ...::|||:  |....:......:..|.:.. .|.|:..::||   .:..:.|.|.
Zfish   213 VGSFILMG-FAFNKVGGYENFRDSYMTAIPSVIGTNISESCYTPRADSFHIFRDPINGDLPWPGL 276

  Fly   270 V-GL----------NQSCVQRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHD--- 320
            : ||          :|..|||.:|..:|.|.:...:|.|:..:|.||...|.|::....:.|   
Zfish   277 LFGLTIQAGWYWCTDQVIVQRCLSAKNLSHVKAGCILCGYLKLLPMFLMVFPGMISRVLYPDEIA 341

  Fly   321 ------CDPIQSGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYF 379
                  |..:....|...:...|..|.|.:.|  |:.|:.:|.:.::.:|:|::..||...:...
Zfish   342 CVDPDECKAVCGAEVGCTNIAYPKLVVDLMPN--GLRGLMLSVMLASLMSSLTSIFNSASTLFTM 404

  Fly   380 D-YIKPHIRHTEHRANVIMKLFVFFTGIYCILGGMVIENFNS--ILQVIYSIGGMSFGSTCGVFM 441
            | |.|...:..|....:..:||:.......|....:::...|  :...|.||..........||.
Zfish   405 DIYTKIRPKAKEKELMIAGRLFMLLLIGISIAWIPIVQTAQSGQLFDYIQSITSYLAPPIAAVFA 469

  Fly   442 LGMLVPKSHGRAAL----VGVLASIACMATIVILSWGRNHYDTLPTSTSACPASLNG 494
            |.:...:.:...|.    ||:|..:|.|.|......|.      ..:.|.||..:.|
Zfish   470 LAIFCKRVNEPGAFYGLCVGLLVGLARMITEFAYGTGS------CVNPSNCPTIICG 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 120/507 (24%)
slc5a1NP_956975.1 SLC5sbd_SGLT1 27..658 CDD:271379 120/507 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580034
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.