DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smvt and slc5a12

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_956662.1 Gene:slc5a12 / 393339 ZFINID:ZDB-GENE-040426-1343 Length:623 Species:Danio rerio


Alignment Length:574 Identity:195/574 - (33%)
Similarity:311/574 - (54%) Gaps:36/574 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIMTI 88
            |.|.||.|||.:..:|:.|||:|....:.:..::|:|:||::|...|:|:||.||.:||::::..
Zfish     7 FQAGDYVVFACLFVVSSGIGVFFAIKERNKAPSKEFLVGGRQMSCGPVALSLTASFMSAVTVIGA 71

  Fly    89 PAEMYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRVLQTFIFILTM 153
            ||::|.:|.::|...|....||.....|.:||||.:.||:.|||||:|||:.|||..|.|:|:..
Zfish    72 PADVYRFGASYVIFGVAYTFVVFFTAELFLPVFYRSGITSTYEYLELRFCKLVRVAATLIYIIQT 136

  Fly   154 FFMLPIFIFLPSLAFAQVTGFNVHLINTVVCS--ICVFYTMFGGIKAVVWTDVIQAAIMVASVVL 216
            .....:.::.|:||..|||||:  |..::..:  :|.||...||:|||||||..|..:||...:.
Zfish   137 ILYTGVVVYAPALALNQVTGFD--LWGSIFATGIVCTFYCTLGGLKAVVWTDAFQMVVMVVGFLT 199

  Fly   217 VGVLGAHRVGGFFEVLRIAGEGGRLDINYNFDLT--TRSTIWNIFTSATMMWTGYVGLNQSCVQR 279
            |.:.|:.|.||...|...:..||||.: ::||::  .|.|.|.:....|..|.|..|:|||.:||
Zfish   200 VLIQGSSRAGGIENVWSTSRTGGRLQV-FDFDVSPLRRHTFWTLSVGGTFTWLGIYGVNQSTIQR 263

  Fly   280 IVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHDCDPIQSGHVSKVDKMVPYFVQDTV 344
            .:|..:.||||.:|.|...|..:|:|....:|:::||.:..|||..||.:|..|:::||||.:.:
Zfish   264 CISCKTEGHARWALYLNLLGLWIILFCAVVSGLIMYSYYSHCDPWSSGLISAPDQLMPYFVMEIL 328

  Fly   345 GNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIKPHIRHTEHR-ANVIMKLFVFFTGIYC 408
            |...|:||:|::|.||..|||::||||:|..|:|.|::........:| |:.|.|......|:.|
Zfish   329 GAFPGLPGLFVACAFSGTLSTVAASINALATVMYEDFVSQCFPDLSNRAASWISKALCVAFGVAC 393

  Fly   409 ILGGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAALVGVLASIACMATI----V 469
            ....:.......|:|...||.||..|...|:|.||:|.|.::.:.|:.|::..|:....:    .
Zfish   394 TTMAVAASYMGGIVQAALSIHGMCGGPVLGLFSLGILFPFTNLKGAVGGLIVGISLSFWVGVGAF 458

  Fly   470 ILSWGRNHYDTLPTSTSACPASLNGTIKDISTASPLFLGSTTEAPVGEKEF---SILDLSFNWYT 531
            |.....|:...|..:|:.|         :|:.|:.....:|......::.:   |...:|:.:|:
Zfish   459 IYPAPSNNTHALELNTAGC---------NITAAAFEPTSATVTQLTSDRNWLADSWYSMSYLYYS 514

  Fly   532 VTGFVITWLIGIPLSYILKSGPDYKPNPKLLSP-------VVQPFVHYKLTPSD 578
            ..||:.|...|:.::  |.:||   .:||||.|       .|..|...|.|.:|
Zfish   515 AVGFIGTVAAGLLIT--LLTGP---MDPKLLKPGMTRSVKEVMCFCTEKFTEAD 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 180/532 (34%)
slc5a12NP_956662.1 SLC5sbd_SMCT2 4..533 CDD:212089 183/539 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580037
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1180002at2759
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR42985
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.950

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