DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and Slc5a9

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_001382057.1 Gene:Slc5a9 / 366441 RGDID:1311383 Length:688 Species:Rattus norvegicus


Alignment Length:679 Identity:154/679 - (22%)
Similarity:259/679 - (38%) Gaps:188/679 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIMTIPAEMY 93
            |.||.|.:.|.::|....|       |...|.:.|:.|...||..||::|.:.:...:.:.....
  Rat    43 YFVFVLAVGIWSSIRASRG-------TIGGYFLAGRSMTWWPIGASLMSSNVGSGLFIGLAGTGA 100

  Fly    94 AYGI---NWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRF-CRKVRVLQTFI-FILTM 153
            |.|:   .:.:|...::|.   |.::.:||:....:....:||:.|| .::::|..:.: .||.:
  Rat   101 AGGLAVGGFEWNATFLLLA---LGWIFVPVYIAAGVVTMPQYLKKRFGGQRIQVYMSVLSLILYI 162

  Fly   154 FFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQAAIMVASVVLVG 218
            |..:...||..:|......|:|::|...::..:...||:.||:.||::||.:|..|||...:::.
  Rat   163 FTKISTDIFSGALFIQMALGWNLYLSTVILLVVTAVYTIAGGLTAVIYTDALQTVIMVGGALVLM 227

  Fly   219 VLGAHRVGGF----------------------------FEVLRIAGEGGRLDINYNFDLTTRSTI 255
            .||...||.:                            |.:||....|         |:.....|
  Rat   228 FLGFREVGWYPGLQQLYRQSIPNVTVPNTTCHLPRSDAFHMLRDPVNG---------DIPWPGLI 283

  Fly   256 WNIFTSATMMWTGYVGLNQSCVQRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHD 320
            :.:...||..|.    .:|..|||.:|..||.||:...||.|:..||.|||....|::..:.:.|
  Rat   284 FGLTVLATWCWC----TDQVIVQRSLSAKSLSHAKGGSVLGGYLKILPMFFIVMPGMISRALYPD 344

  Fly   321 ---------CDPIQSGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGGV 376
                     |..:....|...:...|..|...:.  .|:.|:.|:.:.:|.:|:|::..||...:
  Rat   345 EVACVDPDICQRVCGARVGCSNIAYPKLVMALMP--VGLRGLMIAVIMAALMSSLTSIFNSSSTL 407

  Fly   377 VYFDYIKPHIRH--TEHRANVIMKLFVFFTGIYCILGGMVIENFNS--ILQVIYSI--------- 428
            ...| :...:|.  :|....|:.:|||.|..:..||...:|::.||  :...|.||         
  Rat   408 FAID-VWQRVRRQASEQELMVVGRLFVVFLVLISILWIPIIQSSNSGQLFDYIQSITSYLAPPIT 471

  Fly   429 ------------------GGMSFGSTCGVFMLGMLVPKSHGRAA--------------------- 454
                              .|:.||...|:  |.|::..|:...|                     
  Rat   472 ALFLLAIFCKRVTEPGAFWGLMFGLVVGI--LRMILEFSYSAPACGEKDRRPAVLKDFHYLYFAL 534

  Fly   455 -LVGVLASIACMATIVILSWGRNHYDTLPTS--------TSACP---------ASLNGTIKDIST 501
             |.|:.|.|     |||:|:   ..:.:|..        |.:||         .|:|.|..|.|.
  Rat   535 LLCGLTAII-----IVIISF---FTEPIPDEKLARLTWWTRSCPISELQKKVSVSVNNTESDNSP 591

  Fly   502 A---SPLFLG--------STTEAPVGEKEFSILDLS-----FNWYTVTGFVITWLIGIPLSYILK 550
            |   .|:..|        :||..|   ::..:|..|     :||:       ..|.|.|      
  Rat   592 ALAGRPVMEGTAGDEEEANTTSEP---EQPEVLHRSWGKWLWNWF-------CGLSGTP------ 640

  Fly   551 SGPDYKPNPKLLSPVVQPFVHYKLTPSDE 579
                    .:.|||..:..:..|||..:|
  Rat   641 --------QQALSPAEKAELEQKLTSIEE 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 147/646 (23%)
Slc5a9NP_001382057.1 SLC5-6-like_sbd 48..688 CDD:382020 151/674 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340152
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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