DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and Slc5a12

DIOPT Version :10

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_001102058.1 Gene:Slc5a12 / 362188 RGDID:1311652 Length:619 Species:Rattus norvegicus


Alignment Length:571 Identity:194/571 - (33%)
Similarity:297/571 - (52%) Gaps:55/571 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIMTI 88
            |.|.||.|||.:..||:.|||:|....:.:.|:.|:|:||::|...|:|:||.||.:||::::..
  Rat     6 FEAWDYVVFAALFVISSGIGVFFAIKERKKTTSREFLVGGRQMSFAPVALSLTASFMSAVTVLGT 70

  Fly    89 PAEMYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRVLQTFIFILTM 153
            |||:|.:|.:::..::....||...:.|.:||||.:.||:.||||::||.:.||...|.|:||..
  Rat    71 PAEVYRFGASFLIFLISYAFVVFFTSELFLPVFYRSGITSTYEYLQLRFNKPVRYAATIIYILQT 135

  Fly   154 FFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQAAIMVASVVLVG 218
            .....:.::.|:||..||||||:.........:|.||...||:|||||||..|..:|:...:.|.
  Rat   136 ILYTGVVVYAPALALNQVTGFNLWASVFATGIVCTFYCSLGGLKAVVWTDAFQMVVMIVGFLTVL 200

  Fly   219 VLGAHRVGGFFEVLRIAGEGGRLDI-NYNFDLTTRSTIWNIFTSATMMWTGYVGLNQSCVQRIVS 282
            :.|::.||||..||..|..|.|||| :::.|...|.|.|.|....|..|.|..|:|||.:||.:|
  Rat   201 IQGSNHVGGFDNVLEQARNGSRLDIVDFDVDPLRRHTFWTIAVGGTFTWLGIYGVNQSTIQRCIS 265

  Fly   283 LPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHDCDPIQSGHVSKVDKMVPYFVQDTVGNL 347
            ..:..||:.:|.....|..:|:....|.|:::|:.:.||||..||.:...|:::||||.:....:
  Rat   266 CKTEKHAKLALYFNLLGLWIIVVCAVFCGLIMYAYYKDCDPWTSGAILAPDQLMPYFVMEIFATM 330

  Fly   348 WGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIK---PHIRHTEHRANVIMKLFVFFTGIYCI 409
            .|:||:|::|.||..|||::||||:|..|.:.|::|   ||:..|  .:..|.|......||.|.
  Rat   331 PGLPGLFVACAFSGTLSTVAASINALATVTFEDFVKSCFPHLSDT--LSTWISKGLCLLFGIICT 393

  Fly   410 LGGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAALVGVLASIACMATIVILSWG 474
            ...::.....|::|...||.||..|...|:|.||::.|..:.:.||.|:|..|.....:.|   |
  Rat   394 SMAVLASLMGSVVQAALSIHGMCGGPMLGLFTLGLVFPFVNWKGALGGLLTGITLSFWVGI---G 455

  Fly   475 RNHYDTLPTSTSACPASLNGTIKDISTASPLFLGSTTEA------PVGEKEFSILDLSFNWYTVT 533
            ...|....:.|...|.|....::...|        ||||      ||         |:..||:::
  Rat   456 AFVYPAPDSKTLPLPLSTEFCVQQNKT--------TTEAYQLSSRPV---------LADTWYSLS 503

  Fly   534 ---------------GFVITWLIGIPLSYILKSGPDYKPNPKLLSPVVQPF 569
                           |.:|::|.|      .:.|.|.  :|.|:.||...|
  Rat   504 YLYFSAVGCLGCIAAGIIISFLTG------RQRGKDV--DPLLIRPVCNLF 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 185/545 (34%)
Slc5a12NP_001102058.1 SLC5sbd_SMCT2 3..527 CDD:212089 186/542 (34%)

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