DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and Slc5a6

DIOPT Version :10

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_808538.1 Gene:Slc5a6 / 330064 MGIID:2660847 Length:634 Species:Mus musculus


Alignment Length:619 Identity:196/619 - (31%)
Similarity:314/619 - (50%) Gaps:57/619 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LATAATVVP--------DSQFVFNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRM 66
            ::.|:|..|        .:...|:..||.||.|:|.:|..||:|......|..|..|.||..::|
Mouse     1 MSVASTAAPFHTTSGSSGAISTFSVVDYVVFGLLLVLSLVIGLYHACRGWGHHTVGELLMADRKM 65

  Fly    67 KTIPIAISLVASQLSAISIMTIPAEMYAYGINWVFNVVC---MVLVVPLLNYLVIPVFYNNNITN 128
            ..:|:|:||:|:..||::|:..|||::.:|..:.| :.|   :.|::|.  ::.|||||..::|:
Mouse    66 GCLPVALSLLATFQSAVAILGAPAEIFRFGTQYWF-LGCSYFLGLLIPA--HIFIPVFYRLHLTS 127

  Fly   129 CYEYLEMRFCRKVRVLQTFIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMF 193
            .|||||:||.:.||:..|..||..|...:.:.::.||||...||||::.|....:..:|..||..
Mouse   128 AYEYLELRFNKAVRICGTVTFIFQMVIYMGVALYAPSLALNAVTGFDLWLSVLALGIVCNIYTAL 192

  Fly   194 GGIKAVVWTDVIQAAIMVASVVLVGVLGAHRVGGFFEVLRIAGEGGRLD-INYNFDLTTRSTIWN 257
            ||:|||:||||.|..:|....::|.::||.||||...|..:..:.|.:. ||.:.|...|.|.|.
Mouse   193 GGLKAVIWTDVFQTLVMFLGQLVVIIVGAARVGGLGHVWNVTSQHGLISGINLDPDPFVRHTFWT 257

  Fly   258 IFTSATMMWTGYVGLNQSCVQRIVSLPSLGHARRSLVLFGFGFI----LIMFFNCFTGIVIYSRF 318
            :......|.....|:||:.|||.:|    .|:.|:.||..:...    :.:..:|..|:|:::.:
Mouse   258 LAFGGVFMMLSLYGVNQAQVQRYLS----SHSERAAVLSCYAVFPCQQVALCMSCLIGLVMFAYY 318

  Fly   319 HDCDPIQSGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIK 383
            :..........:..|::|.|||.|.:.::.|:||:|::|:||.:|||:|::.|||..|...|.|:
Mouse   319 NMYSMSPELKQAAPDQLVLYFVMDLLKDMPGLPGLFVACLFSGSLSTISSAFNSLATVTMEDLIQ 383

  Fly   384 PHI-RHTEHRANVIMKLFVFFTGIYCILGGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVP 447
            |.. :.||.||.::.:...|..|:.|:....:..:..|:||...||.||..|...|:|.||:..|
Mouse   384 PWFPQLTETRAIMLSRGLAFAYGLVCLGMAYISSHLGSVLQAALSIFGMVGGPLLGLFCLGLFFP 448

  Fly   448 KSHGRAALVGVLASIACMATIVILSWGRNHYDTLPTSTSACPASLNG---------TIKDISTAS 503
            .::...|:||:|..:.....|.|.|      .....|::..|..|||         |:..::|..
Mouse   449 CANPLGAIVGLLTGLTMAFWIGIGS------IVSRMSSAVAPPPLNGSSSFLPANVTVAAVTTVM 507

  Fly   504 PLFLGSTTEAPVGEKEFSILDLSFNWYT--------VTGFVITWLIGIPLSYILKSGPDYKPNPK 560
            |    ||...|.|.:.|  ..||:.||:        |.|.:::.|.|......|..|..|...||
Mouse   508 P----STLSKPTGLQHF--YSLSYLWYSAHNSTTVIVVGLIVSLLTGGMRGRSLNPGTIYPVLPK 566

  Fly   561 LLS--PV-VQPFVHYKLTPSDEPHQLNLEKPEKV 591
            ||:  |: .|..:.::....|.|...|| .|||:
Mouse   567 LLALLPLSCQKRLCWRSHSQDIPVIPNL-FPEKM 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 176/546 (32%)
Slc5a6NP_808538.1 SLC5-6-like_sbd 23..548 CDD:444915 176/543 (32%)

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