DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and Slc5a10

DIOPT Version :10

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_001100477.1 Gene:Slc5a10 / 303205 RGDID:1305232 Length:596 Species:Rattus norvegicus


Alignment Length:569 Identity:132/569 - (23%)
Similarity:242/569 - (42%) Gaps:83/569 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PDSQFVFNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSA 82
            |.||  .:.:|..|.:|..:::.|:||:....| .::|...|.:.|:.|...||..||.||...:
  Rat    12 PGSQ--LSTSDIIVISLYFALNVAVGVWTACRA-NKNTVSGYFLAGRDMAWWPIGASLFASSEGS 73

  Fly    83 ISIMTIPAEMYAYGI---NWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRF-CRKVRV 143
            ...:.:.....|.|:   .:.:|...::|.   |.::.:|::.::.|....||::.|| .:::|:
  Rat    74 GLFIGLAGSGAAGGLAVAGFEWNATYVLLA---LAWVFVPIYVSSEIVTLPEYIQKRFGGQRIRM 135

  Fly   144 -LQTFIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQA 207
             |.....:|::|..:.|.::..:|......|:|.:|...:..:|...||:.||:..|::||.:|.
  Rat   136 YLSVLSLLLSVFTKISIDLYAGALFVHICLGWNFYLSTILTLAITALYTIAGGLATVIYTDALQT 200

  Fly   208 AIMVASVVLVGVLGAHRVGGFFEVLRIAGEGG--------------RLDINYNF-DLTTRSTIWN 257
            ||||...|::.|...:::|| :|.|..|....              |.|..:.| |.:|....|.
  Rat   201 AIMVVGAVILAVKAFNQIGG-YEQLEAAYAQATPSRTIPNTTCHLPRADAMHMFRDPSTGDLPWT 264

  Fly   258 IFT-SATMMWTGYVGLNQSCVQRIVSLPSLGHARRSLVLFGF------------GFILIMFFNCF 309
            ..| ..|:|.|.|...:|..|||.:|..:|.||:...:|..:            |.|..:.|...
  Rat   265 GMTFGLTIMATWYWCTDQVIVQRSLSARNLNHAKAGSILASYLKMLPMGLMIMPGMISRVLFPDD 329

  Fly   310 TGIVIYSRFHDCDPIQSGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLG 374
            .|.|:.|   :|.......:...:...|..|.:.:.  .|:.|:.|:.:.:|.||:|::..||..
  Rat   330 VGCVVPS---ECLRACGAEIGCSNIAYPKLVMELMP--IGLRGLMIAVMMAALLSSLTSIFNSSS 389

  Fly   375 GVVYFD---YIKPHIRHTEHRANVIMKLFVFFTGIYCILGGM------VIENFNSILQVIY--SI 428
            .:...|   ..:|.....|        |.:....:..:|.|:      |::..||....||  |:
  Rat   390 TLFTMDIWRQFRPGAGERE--------LLLVGRLVIVVLVGVSVAWIPVLQGSNSGQLFIYMQSV 446

  Fly   429 GGMSFGSTCGVFMLGMLVPKSHGRAALVGVLASIACMATIVILS--WGRNHYDTLPTSTSACPAS 491
            ..........:|:||:...:::.:.|..|::|.:...|..::|.  :...|...:.|.    |..
  Rat   447 TSSLAPPVTAIFLLGIFWRRANEQGAFWGLMAGLLVGALRLVLEFLYPEPHCGQIDTR----PFP 507

  Fly   492 LNGTIKDISTASPLFL--------GSTTEAPVGEKEFSILDLSFNWYTV 532
            | |:|..:..|..||.        ||....|..:::..    :..|:|:
  Rat   508 L-GSIHYLHFAIALFFLTCAVMAAGSLLSPPPQQRQIE----NLTWWTL 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 129/560 (23%)
Slc5a10NP_001100477.1 SLC5-6-like_sbd 17..596 CDD:444915 129/562 (23%)

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