DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and SPAC869.03c

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_595016.1 Gene:SPAC869.03c / 2543152 PomBaseID:SPAC869.03c Length:661 Species:Schizosaccharomyces pombe


Alignment Length:603 Identity:120/603 - (19%)
Similarity:216/603 - (35%) Gaps:140/603 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YGV-------FALV-LSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISI 85
            ||:       ||:| :.::..:..|.|   :.:| :|.:....:.:||..|:.::|:|.....::
pombe    12 YGIVIGLGFAFAIVMILVTYVLKRYVG---EVQD-SEHFTTASRSVKTGLISSAVVSSWTWPGTL 72

  Fly    86 MTIPAEMYAYGI------NWVFNV-VCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRV 143
            :|.....|.||:      ::.|.| :....|:.|....|.|     ......|.::.||.:....
pombe    73 LTSAGMAYEYGVCGSMWYSFAFTVQITFFTVIALQVKRVAP-----GAHTIVEIVKARFGQASHA 132

  Fly   144 LQTFIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVV---WTDVI 205
            :..|..:.|...:..:.:...|.|.:.:||.:|.....::......||:.||:|:..   ||..:
pombe   133 VFLFYALGTNIIVSAMLLLGGSQAISAITGMHVVAAGFLLPLGVWLYTVSGGLKSTFLSDWTHTV 197

  Fly   206 QAAIMVASVVLVGVLGAHRVGGFFEVLRIAGEGGRLDINYNFDLTTRSTIWNIFTSATMMWTGYV 270
            ...|::...:.|....:..:|               .|:..:||.|.       .|.|...|||.
pombe   198 IVYIVILITLFVAYTSSVHIG---------------SIDKMYDLLTE-------VSKTNPSTGYK 240

  Fly   271 GLNQSCVQR----------------IVSLPSLGH---------ARRSLVLFGFGFILIMF----- 305
            |...:...|                :...||.|.         |.:.....|..::::.:     
pombe   241 GSYLTVTNRDAVFVGWNIVIGGFATVFCDPSYGQKAIAAKPISAMKGYFAGGLAWLIVPWAMGSA 305

  Fly   306 --FNCFT-----GIVIYSRFHDCDPIQSGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAAL 363
              .:|..     ..|.|.     ||:.|..||:...:: |.:...:|......||.|  :|.|:.
pombe   306 AALSCLALTNNPVSVTYP-----DPVSSKQVSEGMPLL-YGMTALMGKNGAAAGVLI--LFMAST 362

  Fly   364 STLSASINSLGGVVYFDYIKPHIRHTEHRANVIMKLFVFFTGIYCILGGMVIENFNSILQVI--- 425
            |..||.:.:...|:.:|..:.:.|.......::....||.| |:.:..|.:...||.|...|   
pombe   363 SATSAELVAFSSVMTYDVYRNYFRPNASGKELVRVTHVFVT-IFAVCMGALAVLFNYIGITISWI 426

  Fly   426 -----YSIGGMSFGSTCGVF-----MLGMLVPKSHGRAALVGVLASIAC-MATIVILSWGRNHYD 479
                 .::|...||.|..:|     ..||::      ...:|.:..:.| :.:....|.|..:..
pombe   427 ITFIGIALGPAVFGITLTLFWKKMNKYGMII------GCPMGSITGVVCWVGSCYKFSNGVVNKT 485

  Fly   480 TLPTSTSACPASLNGTIK-----------------DISTASPLF-LG--STTEAPV-GEKEFSIL 523
            ||.|..:....:..|...                 |::..:..| ||  :|.|..| .|.|...|
pombe   486 TLNTPYANAVGNFTGLFSGLIYIVLISYFFPNKSDDLNNLNEKFVLGDDATAEEIVDAETEKKQL 550

  Fly   524 DLSFNWYTVTGFVITWLI 541
            |.|..    .|..::|:|
pombe   551 DRSLR----IGIFVSWII 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 120/603 (20%)
SPAC869.03cNP_595016.1 SLC5sbd_DUR3 12..515 CDD:271370 105/548 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 74 1.000 Domainoid score I2508
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 80 1.000 Inparanoid score I1855
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
TreeFam 00.000 Not matched by this tool.
43.950

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