DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and SPOM_SPAC869.03C

DIOPT Version :10

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_595016.1 Gene:SPOM_SPAC869.03C / 2543152 PomBaseID:SPAC869.03C Length:661 Species:Schizosaccharomyces pombe


Alignment Length:603 Identity:120/603 - (19%)
Similarity:216/603 - (35%) Gaps:140/603 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YGV-------FALV-LSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISI 85
            ||:       ||:| :.::..:..|.|   :.:| :|.:....:.:||..|:.::|:|.....::
pombe    12 YGIVIGLGFAFAIVMILVTYVLKRYVG---EVQD-SEHFTTASRSVKTGLISSAVVSSWTWPGTL 72

  Fly    86 MTIPAEMYAYGI------NWVFNV-VCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRV 143
            :|.....|.||:      ::.|.| :....|:.|....|.|     ......|.::.||.:....
pombe    73 LTSAGMAYEYGVCGSMWYSFAFTVQITFFTVIALQVKRVAP-----GAHTIVEIVKARFGQASHA 132

  Fly   144 LQTFIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVV---WTDVI 205
            :..|..:.|...:..:.:...|.|.:.:||.:|.....::......||:.||:|:..   ||..:
pombe   133 VFLFYALGTNIIVSAMLLLGGSQAISAITGMHVVAAGFLLPLGVWLYTVSGGLKSTFLSDWTHTV 197

  Fly   206 QAAIMVASVVLVGVLGAHRVGGFFEVLRIAGEGGRLDINYNFDLTTRSTIWNIFTSATMMWTGYV 270
            ...|::...:.|....:..:|               .|:..:||.|.       .|.|...|||.
pombe   198 IVYIVILITLFVAYTSSVHIG---------------SIDKMYDLLTE-------VSKTNPSTGYK 240

  Fly   271 GLNQSCVQR----------------IVSLPSLGH---------ARRSLVLFGFGFILIMF----- 305
            |...:...|                :...||.|.         |.:.....|..::::.:     
pombe   241 GSYLTVTNRDAVFVGWNIVIGGFATVFCDPSYGQKAIAAKPISAMKGYFAGGLAWLIVPWAMGSA 305

  Fly   306 --FNCFT-----GIVIYSRFHDCDPIQSGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAAL 363
              .:|..     ..|.|.     ||:.|..||:...:: |.:...:|......||.|  :|.|:.
pombe   306 AALSCLALTNNPVSVTYP-----DPVSSKQVSEGMPLL-YGMTALMGKNGAAAGVLI--LFMAST 362

  Fly   364 STLSASINSLGGVVYFDYIKPHIRHTEHRANVIMKLFVFFTGIYCILGGMVIENFNSILQVI--- 425
            |..||.:.:...|:.:|..:.:.|.......::....||.| |:.:..|.:...||.|...|   
pombe   363 SATSAELVAFSSVMTYDVYRNYFRPNASGKELVRVTHVFVT-IFAVCMGALAVLFNYIGITISWI 426

  Fly   426 -----YSIGGMSFGSTCGVF-----MLGMLVPKSHGRAALVGVLASIAC-MATIVILSWGRNHYD 479
                 .::|...||.|..:|     ..||::      ...:|.:..:.| :.:....|.|..:..
pombe   427 ITFIGIALGPAVFGITLTLFWKKMNKYGMII------GCPMGSITGVVCWVGSCYKFSNGVVNKT 485

  Fly   480 TLPTSTSACPASLNGTIK-----------------DISTASPLF-LG--STTEAPV-GEKEFSIL 523
            ||.|..:....:..|...                 |::..:..| ||  :|.|..| .|.|...|
pombe   486 TLNTPYANAVGNFTGLFSGLIYIVLISYFFPNKSDDLNNLNEKFVLGDDATAEEIVDAETEKKQL 550

  Fly   524 DLSFNWYTVTGFVITWLI 541
            |.|..    .|..::|:|
pombe   551 DRSLR----IGIFVSWII 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 120/603 (20%)
SPOM_SPAC869.03CNP_595016.1 SLC5sbd_DUR3 12..515 CDD:271370 105/548 (19%)

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