DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and Slc5a12

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_001003915.1 Gene:Slc5a12 / 241612 MGIID:2138890 Length:623 Species:Mus musculus


Alignment Length:582 Identity:197/582 - (33%)
Similarity:300/582 - (51%) Gaps:73/582 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIMTI 88
            |.|.||.|||.:..||:.|||:|....:.:.|:.|:|:||::|...|:|:||.||.:||::::..
Mouse     6 FEAWDYVVFAGLFVISSGIGVFFAIKERKKTTSREFLVGGRQMSFGPVALSLTASFMSAVTVLGT 70

  Fly    89 PAEMYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRVLQTFIFILTM 153
            |||:|.:|.::...::..|.||...:.|.:||||.:.||:.||||::||.:.||...|.|:|:..
Mouse    71 PAEVYRFGASFFLFLISYVFVVFFTSELFLPVFYRSGITSTYEYLQLRFNKPVRYAATIIYIVQT 135

  Fly   154 FFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQAAIMVASVVLVG 218
            .....:.::.|:||..||||||:.........:|.||...||:|||||||..|..:|:...:.|.
Mouse   136 ILYTGVVVYAPALALNQVTGFNLWASVFATGIVCTFYCSLGGLKAVVWTDAFQMVVMIVGFLTVL 200

  Fly   219 VLGAHRVGGFFEVLRIAGEGGRLDI-NYNFDLTTRSTIWNIFTSATMMWTGYVGLNQSCVQRIVS 282
            :.|::.||||..||..||.|.||.| :::.|...|.|.|.|....|..|.|..|:|||.:||.:|
Mouse   201 IQGSNHVGGFNNVLEKAGNGSRLHIVDFDVDPLRRHTFWTITIGGTFTWLGVYGVNQSTIQRCIS 265

  Fly   283 LPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHDCDPIQSGHVSKVDKMVPYFVQDTVGNL 347
            ..:..||:.:|.....|..:|:....|:|:::||.|.||||..||.:|..|:::||||.:....:
Mouse   266 CKTEKHAKLALYFNLLGLWIIVACAVFSGLIMYSHFKDCDPWTSGVISAPDQLMPYFVMEIFATM 330

  Fly   348 WGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIK---PHIRHTEHRANVIMKLFVFFTGIYCI 409
            .|:||:|::|.||..|||::||||:|..|.:.|::|   ||:  ::..:..|.|......||.|.
Mouse   331 PGLPGLFVACAFSGTLSTVAASINALATVTFEDFVKSCFPHL--SDKLSTWISKGLCILFGIMCT 393

  Fly   410 LGGMVIENFNSILQV--IYS----IGG---MSFGSTC-GVFMLGMLVPKSHGRAALVGVLASIAC 464
            ...:|.....|::|.  |.|    |.|   .:..|.| ||.:..:::      .||.|:|..|..
Mouse   394 SMAVVASLMGSVVQAPGIVSQERAITGSFQRNLASVCYGVSIWKLIM------GALGGLLTGITL 452

  Fly   465 MATIVILSWGRNHYDT-------LPTSTSACPASLNGTIKDISTASPLFLGSTTEAPVGEKEFSI 522
            ...:.|   |...|..       ||.||..| ..||.|    :|.:|    ..:..||       
Mouse   453 SFWVAI---GSFIYPAPESKTLPLPLSTEHC-VELNIT----TTVAP----QISSRPV------- 498

  Fly   523 LDLSFNWYTVT---------------GFVITWLIGIPLSYILKSGPDYKPNPKLLSPVVQPF 569
              |:..||:::               |.:|::|.|      .:.|.|.  :|.|:.||...|
Mouse   499 --LADTWYSLSYLYFSAVGCLGCIAAGIIISFLTG------KQRGKDI--DPLLIRPVCNLF 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 188/556 (34%)
Slc5a12NP_001003915.1 SLC5-6-like_sbd 3..531 CDD:294310 189/553 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836508
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR42985
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.840

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