DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and Slc5a8

DIOPT Version :10

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_663398.2 Gene:Slc5a8 / 216225 MGIID:2384916 Length:611 Species:Mus musculus


Alignment Length:595 Identity:219/595 - (36%)
Similarity:315/595 - (52%) Gaps:52/595 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIMTI 88
            |...||.|||.:|.||||||:|:.|...|:.|::::||||:.|..:|:|:||.||.:||::::..
Mouse    10 FVVWDYVVFAGMLLISAAIGIYYAFAGGGQQTSKDFLMGGRSMSAVPVALSLTASFMSAVTVLGT 74

  Fly    89 PAEMYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRVLQTFIFILTM 153
            |||:|.:|..:...|:....||.:...:.:||||...||:.|||||:||.|.:|:..|.:||:..
Mouse    75 PAEVYRFGAIFSIFVITYFFVVVISAEVFLPVFYRLGITSTYEYLELRFNRCIRLCGTILFIVQT 139

  Fly   154 FFMLPIFIFLPSLAFAQVTGFNVHLINTVVCS--ICVFYTMFGGIKAVVWTDVIQAAIMV---AS 213
            .....|.|:.|:||..|||||:  |...||.:  :|.||...||:||||||||.|..|||   ||
Mouse   140 ILYTGIVIYAPALALNQVTGFD--LWGAVVATGVVCTFYCTLGGLKAVVWTDVFQVGIMVAGFAS 202

  Fly   214 VVLVGVLGAHRVGGFFEVLRIAGEGGRLDINYNFDLT--TRSTIWNIFTSATMMWTGYVGLNQSC 276
            |::...:..|   |..::|..|..||||:. :|||..  .|.|.|.|....|..||...|:|||.
Mouse   203 VIIQASITQH---GINKILSDAFNGGRLNF-WNFDPNPLQRHTFWTIVIGGTFTWTTIYGVNQSQ 263

  Fly   277 VQRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHDCDPIQSGHVSKVDKMVPYFVQ 341
            |||.:|..|..||:.||.:...|..:|:..:.|.|:.:|||:.:|||..|..||.:|:::||.|.
Mouse   264 VQRYISCKSRLHAKLSLYVNLVGLWVILTCSIFCGLALYSRYRECDPWTSKKVSAIDQLMPYLVL 328

  Fly   342 DTVGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIKPHIRH-TEHRANVIMKLFVFFTG 405
            |.:.|..|:||:|::|.:|..|||:|:|||:|..|...|.|||..:. :|...:.|.:......|
Mouse   329 DILKNYPGVPGLFVACAYSGTLSTVSSSINALAAVTVEDLIKPRFKSLSEKSLSWISQGMSVLYG 393

  Fly   406 IYCILGGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAALVGVLASIACMATIVI 470
            ..||....:.....::||...||.||..|...|:|.||:|||.::...||.|:||..|....:.|
Mouse   394 ALCIGMAALASLMGALLQAALSIFGMVGGPLLGLFSLGILVPFANSIGALTGLLAGFAISLWVGI 458

  Fly   471 LSWGRNHYDTLPTSTSACPASLNGTIKDISTASPLFLGSTTEAPVGEKEFSI-----LDLSFNWY 530
               |...|..||..|...|....|.  :|:.....:: ||||.|.....|.|     ..|..|||
Mouse   459 ---GAQLYPPLPERTLPLPLETYGC--NITHNGSDWM-STTEMPFSTSAFQIHNAERTPLMDNWY 517

  Fly   531 TVT-------GFVITWLIGIPLSYILKSGPDYKPNPKLLSPVVQPF-------------VHYKLT 575
            :::       |.:.|..:||.:| :...|.....:|:.|. ..|.|             ::|||.
Mouse   518 SLSYLYFSTIGTLTTLFVGILIS-LSTGGRKQNLDPRFLL-TKQDFLSNFDVFKKRNHVLNYKLH 580

  Fly   576 P-----SDEP 580
            |     :|.|
Mouse   581 PVEVGGTDNP 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 207/540 (38%)
Slc5a8NP_663398.2 SLC5sbd_SMCT1 7..549 CDD:271402 209/551 (38%)
PDZ-binding. /evidence=ECO:0000250|UniProtKB:Q8N695 609..611
Blue background indicates that the domain is not in the aligned region.

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