DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and Slc5a1

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_062784.3 Gene:Slc5a1 / 20537 MGIID:107678 Length:665 Species:Mus musculus


Alignment Length:613 Identity:137/613 - (22%)
Similarity:255/613 - (41%) Gaps:122/613 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSLLNATVLATAATVVPDSQFVFNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRM 66
            ||.|:..|.||.|. :|..:.:.||.|..|..:...:..|:|:: ..|:....|...:.:.|:.|
Mouse     3 SSTLSPAVTATDAP-IPSYERIRNAADISVIVIYFVVVMAVGLW-AMFSTNRGTVGGFFLAGRSM 65

  Fly    67 KTIPIAISLVASQLSAISIMTIPAEMYAYGI---NWVFNVVCMVLVVPLLNYLVIPVFYNNNITN 128
            ...||..||.||.:.:...:.:.....|.||   .:.:|.:.:|:|   |.::.:|::....:..
Mouse    66 VWWPIGASLFASNIGSGHFVGLAGTGAAAGIAMGGFEWNALVLVVV---LGWIFVPIYIKAGVVT 127

  Fly   129 CYEYLEMRFCRKVRVLQTFIFILTMFFMLPIF------IFLPSLAFAQVTGFNVHLINTVVCSIC 187
            ..|||..||..|  .:|.::.:|::  :|.||      ||..::......|.:::|...::.:|.
Mouse   128 MPEYLRKRFGGK--RIQIYLSVLSL--LLYIFTKISADIFSGAIFINLALGLDIYLAIFILLAIT 188

  Fly   188 VFYTMFGGIKAVVWTDVIQAAIM-VASVVLVGVLGAHRVGGFFEVL---------RIAGEGGRLD 242
            ..||:.||:.||::||.:|.||| |.|.:|.| ...:.|||:...:         :::       
Mouse   189 ALYTITGGLAAVIYTDTLQTAIMLVGSFILTG-FAFNEVGGYEAFMDKYMKAIPTKVS------- 245

  Fly   243 INYNFD-----LTTRSTIWNIF---TSATMMWTGYV-GL----------NQSCVQRIVSLPSLGH 288
             |.||.     .|.|:..::||   .:..|.|.|.: ||          :|..|||.:|..::.|
Mouse   246 -NGNFTAKEECYTPRADSFHIFRDPITGDMPWPGLIFGLAILALWYWCTDQVIVQRCLSAKNMSH 309

  Fly   289 ARRSLVLFGFGFILIMFFNCFTGI---VIYSRF------HDCDPIQSGHVSKVDKMVPYFVQDTV 344
            .:....|.|:..:|.||.....|:   ::|:..      .:|.......|...:...|..|.:.:
Mouse   310 VKAGCTLCGYLKLLPMFLMVMPGMISRILYTEKIACVLPEECQKYCGTPVGCTNIAYPTLVVELM 374

  Fly   345 GNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFD-YIKPHIRHTEHRANVIMKLFVFFTGIYC 408
            .|  |:.|:.:|.:.::.:|:|::..||...:...| |.|...:.:|....:..:||:.      
Mouse   375 PN--GLRGLMLSVMMASLMSSLTSIFNSASTLFTMDIYTKIRKKASEKELMIAGRLFIL------ 431

  Fly   409 ILGGM------VIENFNS--ILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAA----LVGVLAS 461
            :|.|:      ::::..|  :...|.||..........||:|.:...:.:.:.|    ::|.|..
Mouse   432 VLIGISIAWVPIVQSAQSGQLFDYIQSITSYLGPPIAAVFLLAIFCKRVNEQGAFWGLILGFLIG 496

  Fly   462 IACMATIVILSWGRNHYDTLPTSTSACPASLNGTIKDISTASPLFLGSTTEAPVGEKEFSILDLS 526
            |:.|.|......|.      ....|.||..:.|                              :.
Mouse   497 ISRMITEFAYGTGS------CMEPSNCPKIICG------------------------------VH 525

  Fly   527 FNWYTVTGFVITWLIGIPLSYILKSGPD 554
            :.::.:..|||:.:..:.:|::.|..||
Mouse   526 YLYFAIILFVISVITILIISFLTKPIPD 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 124/580 (21%)
Slc5a1NP_062784.3 SLC5-6-like_sbd 27..665 CDD:294310 127/588 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836499
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7664
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.690

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