DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and F52H2.4

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_001360058.1 Gene:F52H2.4 / 186132 WormBaseID:WBGene00018716 Length:491 Species:Caenorhabditis elegans


Alignment Length:508 Identity:126/508 - (24%)
Similarity:233/508 - (45%) Gaps:65/508 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 VLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRVLQTFIFILTMFFMLPIFIFLPSLAFAQV 171
            |:..|::.::.:||.|...:|..|||.|.||..|.|.:.|.:|.:.|.....:.::.||||.|.:
 Worm    10 VISFPIVAFVFLPVLYRLKLTTIYEYFERRFDYKCRFVTTSLFCVQMILYNSVALYAPSLAIASI 74

  Fly   172 TGFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQAAIMVASVVLVGVLGAHRVGGFFEVLRIAG 236
            |...:.:...:...:..||...||:||.:.|..||..::..::..:..:....: ...:|.....
 Worm    75 TNIPITVSILITAVLSAFYISVGGVKAGIHTSAIQMLLIFLTMTFIISISLREM-SIHDVYTSVV 138

  Fly   237 EGGRLDIN-YNFDLTTRSTIWNIFTSATMMWTGYVGLNQSCVQRIVSLPSLGHARRSLVLFGFGF 300
            .|.|..:| :..:.|.|.::|::....|.........||..:||.:::.:|..|::.::|.....
 Worm   139 HGKRFILNDFRINPTIRHSVWSLLIGGTGNILALFAANQLSIQRYMAMDTLKSAQKVVLLNIVCN 203

  Fly   301 ILIMFFNCFTGIVIYSRFHDCDPIQSGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALST 365
            .:|:......|.:||:.:.||.|    .:...::::|.||.|......|..|:|.:.|:||.:||
 Worm   204 TIILVSYVSVGFLIYAHYKDCHP----QIGNANELLPRFVMDVTSKYPGSVGLFAAAVYSAGIST 264

  Fly   366 LSASINSLGGVVYFDYIKPH--------IRHTE-HRANVIMKLFVFFTGIYCILGGMVIENFNSI 421
            ||||..::..:|..|..|.:        :|:.: ..|..|:.:.:.|..|:......::::.  |
 Worm   265 LSASFTAVSSIVINDVWKVYRERRKMAPLRNDQVQNAMRILPIVLSFISIFVAFLCSMLQSI--I 327

  Fly   422 LQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAALVGVLASIACMATI-----------VILSWGR 475
            |||.:.:.|...|...|.|::|:.||:...:|||||::.||....:|           |.|..|:
 Worm   328 LQVSFIVFGAGGGPVLGSFVVGLFVPRVKEKAALVGLIGSIIVCFSISIGSVLVKVKPVALELGQ 392

  Fly   476 NHYDTLPTSTSACPASLNGTIKDISTASPLFLGSTTEAPVG---EKEFSILDLSFNWYTVTGFVI 537
            ....||             |..|.|     |:|:.|..|:.   |:.|:|   |:.:|::.. |:
 Worm   393 CSNQTL-------------TYFDES-----FIGAVTSTPLVFGLERIFAI---SYQYYSIIA-VV 435

  Fly   538 TWLIGIPLSYILKS-------GPDYKP-NPKLLSPVVQPFVHYKLTPSDEPHQ 582
            |   .:.||.:::.       ..::.| :.:|:||:: .:...|..|..|.|:
 Worm   436 T---NVALSIVMQKLFELCSLTANHLPVSHELVSPLL-TYSSSKRDPELEAHR 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 118/464 (25%)
F52H2.4NP_001360058.1 SLC5-6-like_sbd 1..447 CDD:382020 118/468 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG29060
OrthoDB 1 1.010 - - D1180002at2759
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 1 1.000 - - otm14518
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.830

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