Protein Alignment Smvt and cho-1

DIOPT Version :10

• Sequence 1: NP_651891.2
• Gene: Smvt / 43744
• FlyBaseID: FBgn0039873
• Length: 591
• Species: Drosophila melanogaster
• Sequence 2: NP_502539.1
• Gene: cho-1 / 178274
• WormBaseID: WBGene00000501
• Length: 576
• Species: Caenorhabditis elegans
• Alignment Length: 644
• Identity: 134/644 - (20%)
• Similarity: 233/644 - (36%)
• Gaps: 185/644 - (28%)

  Fly    30 GVFALVL--SISAAIGVYFGFFAKGED--------TTEEYLMGGKRMKTIPIAISLVASQLSAIS 84
            |:.|:|.  .:...:|::.|..:|...        .|||.::.|:.:.|:             :.
 Worm     6 GIVAIVFFYVLILVVGIWAGRKSKSSKELESEAGAATEEVMLAGRNIGTL-------------VG 57

  Fly    85 IMTIPAEMYAYGINWVFNVVCMVLVVPLLNYL--VIPVFYNNNITNCYEYL---------EMRFC 138
            |.|:.|       .||...           |:  .....||..:..|...:         .:.|.
 Worm    58 IFTMTA-------TWVGGA-----------YINGTAEALYNGGLLGCQAPVGYAISLVMGGLLFA 104

  Fly   139 RKVRVLQTFIFILTMF-----FMLPIFIFLPSL----------------AFAQVTGFNVHLINTV 182
            :|:|. :.:|.:|..|     ..:...:::|:|                ..:.:.|.:::...|:
 Worm   105 KKMRE-EGYITMLDPFQHKYGQRIGGLMYVPALLGETFWTAAILSALGATLSVILGIDMNASVTL 168

  Fly   183 VCSICVFYTMFGGIKAVVWTDVIQA-AIMVASVVLVGVLGAHRVGGFFEVLRIAGE-----GGRL 241
            ...|.||||..||..||.:|||:|. .|.|...|.|.....|  .|..::.|.||:     ||..
 Worm   169 SACIAVFYTFTGGYYAVAYTDVVQLFCIFVGLWVCVPAAMVH--DGAKDISRNAGDWIGEIGGFK 231

  Fly   242 DINYNFD----LTTRSTIWNIFTSATMMWTGYVGLNQSCVQRIVSLPSLGHARRSLVLFGFGFIL 302
            :.:...|    |......|.::                 .||::|..:...|:....:.|.|.||
 Worm   232 ETSLWIDCMLLLVFGGIPWQVY-----------------FQRVLSSKTAHGAQTLSFVAGVGCIL 279

  Fly   303 IMFFNCFTGIVI---------YSRFHDCDPIQSGHVSKVDKMVPYFVQDTVGNLW----GMPGVF 354
            :.......|.:.         ||.:::...::|....|.:.:||...|..... |    |:..|.
 Worm   280 MAIPPALIGAIARNTDWRMTDYSPWNNGTKVESIPPDKRNMVVPLVFQYLTPR-WVAFIGLGAVS 343

  Fly   355 ISCVFSAALSTLSASINSLGGVVYFDYIKPHIRHTEHRANVIMKLFVFFTGIYCILGGMVIEN-- 417
            .:.:.||..|.|||: :.....::...|:||.  :|....::|::.:...||...:..:.|::
 Worm   344 AAVMSSADSSVLSAA-SMFAHNIWKLTIRPHA--SEKEVIIVMRIAIICVGIMATIMALTIQSIY 405

  Fly   418 --------------FNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAALVG--VLASIACMA 466
                          |..:|.|:|.....::||..| :.:|:::       .|:|  .|.|:....
 Worm   406 GLWYLCADLVYVILFPQLLCVVYMPRSNTYGSLAG-YAVGLVL-------RLIGGEPLVSLPAFF 462

  Fly   467 TIVILSWGRNHYDTLPTSTSACPASLNGTIKDISTASPLFLGSTTEAPVGEKEFSILDLSFNWYT 531
            ...:.:.|..::   |..|:|..:|: .||..:|..|             ||.|....||..| .
 Worm   463 HYPMYTDGVQYF---PFRTTAMLSSM-ATIYIVSIQS-------------EKLFKSGRLSPEW-D 509

  Fly   532 VTGFVITWLIG-IPL----SYILKS------GPDYKPNPKLLSPVVQPFVHYKLTPSDE 579
            |.|.|:...|. :||    |:.:.|      .|:..|.|          ||....||||
 Worm   510 VMGCVVNIPIDHVPLPSDVSFAVSSETLNMKAPNGTPAP----------VHPNQQPSDE 558

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Smvt	NP_651891.2	SLC5sbd_NIS-SMVT	27..548	CDD:271383	124/605 (20%)
cho-1	NP_502539.1	SLC5sbd_CHT	7..492	CDD:271368	108/551 (20%)