DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and Slc5a6

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_570102.1 Gene:Slc5a6 / 170551 RGDID:69648 Length:634 Species:Rattus norvegicus


Alignment Length:614 Identity:200/614 - (32%)
Similarity:317/614 - (51%) Gaps:46/614 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TVLATAAT--VVPDSQFV---FNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMK 67
            ||.:|||.  ...|:..|   |:..||.||.|:|.:|..||:|......|..|..|.||..::|.
  Rat     2 TVASTAAPSYTTSDTNRVISTFSVVDYVVFGLLLVLSLVIGLYHACRGWGRHTVGELLMADRKMG 66

  Fly    68 TIPIAISLVASQLSAISIMTIPAEMYAYGINWVFNVVC---MVLVVPLLNYLVIPVFYNNNITNC 129
            .:|:|:||:|:..||::|:..|||:|.:|..:.| :.|   :.|::|.  ::.|||||..::|:.
  Rat    67 CLPVALSLLATFQSAVAILGGPAEIYRFGTQYWF-LGCSYFLGLLIPA--HIFIPVFYRLHLTSA 128

  Fly   130 YEYLEMRFCRKVRVLQTFIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFG 194
            |||||:||.:.||:..|..||..|...:.:.::.||||...||||::.|....:..:|..||..|
  Rat   129 YEYLELRFNKAVRICGTVTFIFQMVVYMGVALYAPSLALNAVTGFDLWLSVLALGIVCNIYTALG 193

  Fly   195 GIKAVVWTDVIQAAIMVASVVLVGVLGAHRVGGFFEVLRIAGEGGRLD-INYNFDLTTRSTIWNI 258
            |:|||:||||.|..||....::|.::||.:|||...|..:|.:.|.:. |..:.|...|.|.|.:
  Rat   194 GLKAVIWTDVFQTLIMFLGQLVVIIVGAAKVGGLGHVWAVASQHGLISGIELDPDPFVRHTFWTL 258

  Fly   259 FTSATMMWTGYVGLNQSCVQRIVSLPSLGHARRSLVLFGFGFI----LIMFFNCFTGIVIYSRFH 319
            ......|.....|:||:.|||.:|    .|:.::.||..:...    :.:..:|..|:|:::.:.
  Rat   259 AFGGVFMMLSLYGVNQAQVQRYLS----SHSEKAAVLSCYAVFPCQQVALCMSCLIGLVMFAYYK 319

  Fly   320 DCDPIQSGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIKP 384
            ..........:..|::|.|||.|.:.::.|:||:|::|:||.:|||:|::.|||..|...|.|:|
  Rat   320 KYSMSPQQEQAAPDQLVLYFVMDLLKDMPGLPGLFVACLFSGSLSTISSAFNSLATVTMEDLIQP 384

  Fly   385 HI-RHTEHRANVIMKLFVFFTGIYCILGGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPK 448
            .. :.||.||.::.:...|..|:.|:....|..:..|:||...||.||..|...|:|.|||..|.
  Rat   385 WFPQLTETRAIMLSRSLAFAYGLVCLGMAYVSSHLGSVLQAALSIFGMVGGPLLGLFCLGMFFPC 449

  Fly   449 SHGRAALVGVLASIAC-----MATIVILSWGRNHYDTLPTSTSACPASLNGTIKDISTASPLFLG 508
            ::...|:||:|..:..     :.:||...........|..|:|..|::|  |:..::|..|    
  Rat   450 ANPLGAIVGLLTGLTMAFWIGIGSIVSRMSSAAASPPLNGSSSFLPSNL--TVATVTTLMP---- 508

  Fly   509 STTEAPVGEKEFSILDLSFNWYT--------VTGFVITWLIGIPLSYILKSGPDYKPNPKLLS-- 563
            ||...|.|.::|  ..||:.||:        ..|.:::.|.|......|..|..|...||||:  
  Rat   509 STLSKPTGLQQF--YSLSYLWYSAHNSTTVIAVGLIVSLLTGGMRGRSLNPGTIYPVLPKLLALL 571

  Fly   564 PV-VQPFVHYKLTPSDEPHQLNLEKPEKV 591
            |: .|..:.::....|.|...|| .|||:
  Rat   572 PLSCQKRLCWRSHNQDIPVVTNL-FPEKM 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 176/542 (32%)
Slc5a6NP_570102.1 SLC5-6-like_sbd 23..548 CDD:382020 176/539 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489472at33208
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X112
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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