DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and slc5a12

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:XP_017948838.2 Gene:slc5a12 / 100495641 XenbaseID:XB-GENE-954044 Length:643 Species:Xenopus tropicalis


Alignment Length:600 Identity:198/600 - (33%)
Similarity:313/600 - (52%) Gaps:59/600 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIMTI 88
            |.:.||.|||.:..:||.|||:|....:.:.::.::|:|||:|...|:|:||.||.:||::::..
 Frog    12 FASWDYVVFAALFLVSAGIGVFFAIKERKKTSSADFLVGGKQMTCGPVALSLTASFMSAVTVLGA 76

  Fly    89 PAEMYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRVLQTFIFILTM 153
            |||:|.:|.::....:....||.....|.:||||.:.||:.|||||:||.|.||...|.::|:..
 Frog    77 PAEVYRFGASFGIFFISYAFVVIFSAELFVPVFYRSGITSTYEYLELRFNRVVRYAATIMYIVQT 141

  Fly   154 FFMLPIFIFLPSLAFAQVTGFNVHLINTVVCS--ICVFYTMFGGIKAVVWTDVIQAAIMVASVVL 216
            .....:.::.|:||..|||||:  |..:||.:  :|.||...||:|||||||..|..:||...:.
 Frog   142 ILYTGVVVYAPALALNQVTGFD--LWGSVVATGIVCTFYCTLGGLKAVVWTDAFQMVVMVVGFLT 204

  Fly   217 VGVLGAHRVGGFFEVLRIAGEGGRLDI-NYNFDLTTRSTIWNIFTSATMMWTGYVGLNQSCVQRI 280
            |.:.|..:.||..::...|..|.|:|| |::.|...|.|.|.|....|..|.|..|:|||.|||.
 Frog   205 VLIEGTIQNGGPSKIWETATNGSRVDIANFDVDPLKRHTFWTIAVGGTFTWLGIYGVNQSTVQRC 269

  Fly   281 VSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHDCDPIQSGHVSKVDKMVPYFVQDTVG 345
            :|..|..||:.:|.|...|..:|:..:.|||:::|:.|..|||..:|.::..|:|:||||.:...
 Frog   270 ISCKSEKHAKLALYLNLLGLWIILVCSVFTGLIMYAHFVSCDPWTAGFITAPDQMMPYFVMNIFS 334

  Fly   346 NLWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIKPHIRH-TEHRANVIMKLFVFFTGIYCI 409
            .:.|:||:|::|.||..|||::||||:|..|.:.|::|...:: ::.::..|.|......||.|.
 Frog   335 KMPGLPGLFVACAFSGTLSTVAASINALATVTFEDFVKNIFKNISDRKSTWISKGLCVLFGILCT 399

  Fly   410 LGGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAALVGVLASIACMATIVILSW- 473
            :..:|......::|...||.||..|...|:|.||::.|.|:.:.||.|:|..      |::..| 
 Frog   400 VMAVVASFMGGVVQAALSIHGMCGGPMLGLFTLGIVFPWSNWKGALGGLLIG------IIMSFWV 458

  Fly   474 GRNHYDTLPTSTSACPASL------------NGTIKDISTASPLFLGSTTEAPVGEKEFSIL--- 523
            |...:...|..|...|..|            |||...::|.:...  ..|:||..    |:|   
 Frog   459 GIGGFVFPPPVTKTFPLELRTDGCILANMTINGTETLVTTLATAL--DPTQAPAR----SVLADN 517

  Fly   524 --DLSFNWYTVTGFVITWLIGIPLSYILKSGPDYKPN--PKLLSPVVQPFV----HYK------- 573
              .||:.:|:..|.:...:.|:.:|::  :|.::..|  |.|:.|:...|.    .||       
 Frog   518 WYSLSYLYYSAVGCLSCIISGLLISFV--TGREHGKNIRPLLIRPICNIFCFWSDKYKTKCWCGV 580

  Fly   574 --------LTPSDEP 580
                    ..|.|.|
 Frog   581 PHDREEEDFDPKDNP 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 186/542 (34%)
slc5a12XP_017948838.2 SLC5-6-like_sbd 9..546 CDD:382020 187/549 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1180002at2759
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR42985
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.020

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