DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and slc5a2

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:XP_002940641.3 Gene:slc5a2 / 100380144 XenbaseID:XB-GENE-5961970 Length:617 Species:Xenopus tropicalis


Alignment Length:598 Identity:115/598 - (19%)
Similarity:224/598 - (37%) Gaps:143/598 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ATVVPDSQ---------FVFNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTI 69
            :|::|::.         .:.|..|..|......|...:|:: ........|...|.:.|:.|...
 Frog     3 STIIPETTSHISPKGNVAISNPADISVIVGYFIIIIGVGLW-SMRRANRGTVGGYFLAGRSMSWG 66

  Fly    70 PIAISLVASQLSAISIMTIPAEMYAYGI---NWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYE 131
            |:..||.||.:.:...:.:.....|.||   .:.:|.:.:||   .|.::.:||:....:....|
 Frog    67 PVGASLFASNIGSGHFVGLAGTGAASGIAVAGFEWNALFVVL---FLGWIFVPVYLTAEVVTMPE 128

  Fly   132 YLEMRF-CRKVRV-LQTFIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFG 194
            ||:.|| .::::: |.....::.:|..:.:.:|..::......|:|::|....:..|...||:.|
 Frog   129 YLKKRFGGQRIQMYLSALSLVMYIFTKISVDMFSGAVFIQVALGWNIYLSVIALLVITTIYTVTG 193

  Fly   195 GIKAVVWTDVIQAAIMVASVVLVGVLGAHRVGGF-----------------------------FE 230
            |:.|:::||.:|..:::....::.|...:.|||:                             ..
 Frog   194 GLAALMYTDTVQTFVIIGGACVLSVYAFNEVGGYDALMEKYMTAVPTVLGNVSESCAVPRADSLH 258

  Fly   231 VLR--IAGEGGRLDINYNFDLTTRSTIWNIFTSATMMWTGYVGLNQSCVQRIVSLPSLGHARRSL 293
            :||  |:|           ||...:.|..:...:|..|..    :|..|||.::..|:.|.:...
 Frog   259 LLRDPISG-----------DLPWPALILGLTIVSTWYWCS----DQVIVQRCLAARSITHVKLGC 308

  Fly   294 VLFGFGFILIMFFNCFTGIVIYSRFHD---------CDPIQSGHVSKVDKMVPYFVQDTVGNLWG 349
            ||.|:..||.||.....|::....|.:         |.......:...:...|..|.:.:.|  |
 Frog   309 VLCGYMKILPMFLMVMPGMISRVLFTEDVACVEPSRCLAACGTKIGCSNIAYPKLVIELMPN--G 371

  Fly   350 MPGVFISCVFSAALSTLSASINSLGGVVYFDYIKPHIRHTEHRANVIMKLFVFFTGIYCIL---- 410
            :.|:.::.:.:|.:|:|::..||.|.:...|.    .|....||.....|.|......|::    
 Frog   372 LRGLMLAVMLAALMSSLASIFNSSGTLFTMDV----WRRMRPRAEEKELLLVGRVWTVCLVALSI 432

  Fly   411 ----------GGMVIENFNSI-------LQVIYSIG---------GMSFGSTCGVFM-LGMLVPK 448
                      ||.:.:...|:       :..:|.:.         |..:|...|:|: |..:||:
 Frog   433 AWIPVVQAAQGGQLFDYIQSVASFLAPPIAAVYFLALFVKRVNEPGAFWGLVGGLFLGLCRMVPE 497

  Fly   449 SHGRAALVGVLASIACMATIVILSWGRNHYDTLPTSTSACPASLNGT-------IKDISTASPLF 506
            .        :..|.:|.|                  .|:||..:.|.       |..:.:.:.:.
 Frog   498 F--------IFGSGSCSA------------------PSSCPTIICGVHYLYFAIILFLCSGAIVL 536

  Fly   507 LGSTTEAPVGEKE 519
            :.|....|:.||:
 Frog   537 IVSLCTPPIPEKK 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 112/576 (19%)
slc5a2XP_002940641.3 SLC5-6-like_sbd 25..617 CDD:382020 112/576 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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