DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and slc5a5

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_001116937.1 Gene:slc5a5 / 100144711 XenbaseID:XB-GENE-486472 Length:600 Species:Xenopus tropicalis


Alignment Length:588 Identity:186/588 - (31%)
Similarity:301/588 - (51%) Gaps:58/588 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PDSQFV------------FNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKRMKTIP 70
            ||::.:            |:..||||||.:|.:|..||:::.|...|:.|::::..||:.|..:|
 Frog    35 PDTEIMEEYVPLVHESLTFSLWDYGVFATMLIMSTGIGLFYAFSHGGQKTSDDFFTGGRSMSAVP 99

  Fly    71 IAISLVASQLSAISIMTIPAEMYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEM 135
            :.:||.||.:||:.::.:|||.|.||:.::...:..:|...:..|:.:|:||...||:.|:||||
 Frog   100 VGLSLSASFMSAVQVLGVPAEAYRYGVKFLQMCIGQILNSVMTAYIFMPIFYRLGITSTYQYLEM 164

  Fly   136 RFCRKVRVLQTFIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVV 200
            ||.|.||:..|..|:|...|...|.|:.|:|...||||.::........:||.|||..||:|||:
 Frog   165 RFSRSVRLYGTIQFLLGTMFYTGIVIYAPALILNQVTGLDIWASLFSTGAICTFYTTVGGMKAVI 229

  Fly   201 WTDVIQAAIMVASVVLVGVLGAHRVGGFFEVLRIAGEGGRLDI-NYNFDLTTRSTIWNIFTSATM 264
            ||||.|..:|::....|.:.|.|.||||.:.:.:||...|::. :::.|...|.|.|.....:|.
 Frog   230 WTDVFQVFVMLSGFFAVAIRGIHLVGGFSDAIEVAGNYSRINFGDFDPDPRRRYTFWTFVMGSTF 294

  Fly   265 MWTGYVGLNQSCVQRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHDCDPIQSGHV 329
            :|....|:||:.|||.|:..:...|:.::::......:|:......|||::..:.:|||:.:|:|
 Frog   295 LWLSMYGVNQAQVQRYVACKTENEAKLAILVNQVALCVIVSSAVTCGIVMFVYYLNCDPLLAGYV 359

  Fly   330 SKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIKPHIRH-TEHRA 393
            |..|:.:||||.:......|:||:|::|.:|..|||.|.|||::..|...|.|:|...: :..:.
 Frog   360 SAPDQYMPYFVLEIFDQYPGIPGLFLACAYSGTLSTASTSINAMAAVTVEDLIRPKYPNISTKKL 424

  Fly   394 NVIMKLFVFFTGIYCI--------LGGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSH 450
            .:|.|......|..||        |||       .:||..:::.|:..|...|.|||||.....:
 Frog   425 TLISKGLSLAYGCSCITVAALSSLLGG-------GVLQGSFTVMGVISGPLLGAFMLGMFFASCN 482

  Fly   451 GRAALVGVLASIACMATIVILSW---GRNHY-------DTLPTSTSACPA--SLNGTIKDISTAS 503
                .:||.|.:  :..:||..|   |...|       ..|||....||.  |..|.|  ...|.
 Frog   483 ----TIGVFAGL--LVGLVISLWVAVGGTIYPPSAEMMGVLPTFAEHCPLYNSSKGII--YGPAP 539

  Fly   504 PLFLGSTTEAPVGEKEFSILDLSFNWYTVTGFVITWLIGIPLSYILKSGPDYKPNPKLLSP--VV 566
            ...:..|.|.|....:  :..||:.:|.|.|.:.|.:||:.:|..  :||..:   :.::|  :|
 Frog   540 VQNITHTLERPALADD--LYALSYLYYGVVGTISTVIIGVIVSKF--TGPTKR---ETIAPGLMV 597

  Fly   567 QPF 569
            .||
 Frog   598 GPF 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 177/542 (33%)
slc5a5NP_001116937.1 SLC5sbd_NIS 56..587 CDD:271393 179/549 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1180002at2759
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR42985
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.020

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