DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smvt and slc5a7a

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:XP_021332411.1 Gene:slc5a7a / 100005589 ZFINID:ZDB-GENE-090313-273 Length:592 Species:Danio rerio


Alignment Length:491 Identity:91/491 - (18%)
Similarity:179/491 - (36%) Gaps:122/491 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 GVFALVL--SISAAIGVYFGFFAK------GEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIM 86
            |:.|:|:  .:...:|::..:..|      |.|.:|..::||:.:.....|.::.|:.:....|.
Zfish     7 GLVAIVIFYLLILLVGIWAAWKNKNSGVMEGTDRSETIMVGGRDIGLFVGAFTMTATWVGGGYIN 71

  Fly    87 TIPAEMY--AYGINWV---FNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRFCRKVRVLQT 146
            .....:|  .:|:.|.   |.....:::..|  :...|:.....:|....:.::...|...:|..
Zfish    72 GTAEYVYLPGFGLAWAQAPFGYALSLVLGGL--FFAKPMRSRGYVTMLDPFQQLYGKRMGGLLFI 134

  Fly   147 FIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQA---- 207
            ...:..||:...|...| ....:.:...::::...:...|.:|||:.||:.:|.:|||:|.    
Zfish   135 PALMGEMFWSAAILSAL-GATLSVIIDIDINMSVVISALIAIFYTLVGGLYSVAYTDVVQLFCIF 198

  Fly   208 ---------AIMVASVVLVGVLGAHRVGGFFEVLRIAGEGGRLDINYNFDLTTRSTIW--NIFTS 261
                     |:...:|..:||....:                        |....|.|  .|.:|
Zfish   199 LGLWVSVPFALSNPAVSDIGVTAVKQ------------------------LHANQTAWLGKIESS 239

  Fly   262 ATMMWTGYVGLNQSCV------------QRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVI 314
            ...||.     :..|:            ||::|..|..:|:....|..||.|::...:...|.:.
Zfish   240 DKWMWA-----DNFCLLMLGGIPWQVYFQRVLSASSATYAQVLSFLAAFGCIIMAIPSVLIGAIG 299

  Fly   315 YS------RFHDCDPIQSGHVSKVDKMVPYFVQDTVG---NLWGMPGVFISCVFSAALSTLSASI 370
            .|      .:....|:|.   .:.|.::|..:|....   :.:|:..|..:.:.||..|.||||.
Zfish   300 ASTDWNQTSYGPIPPMQK---DQSDMILPIVLQHLCPAYISFFGLGAVSAAVMSSADSSILSASS 361

  Fly   371 NSLGGVVYFDYIKPHIRHTEHRANVI----MKLFVF---------FTG------------IYCIL 410
            .....:....:     |.:.....::    :.:|||         .||            :|.|:
Zfish   362 MFARNIYQLAF-----RQSASDREIVWVMRITIFVFGALATAMALLTGTVYGLWYLSSDLVYVII 421

  Fly   411 GGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLV 446
                   |..:|.|::..|..::||..|.| .|:::
Zfish   422 -------FPQLLSVLFIRGTNTYGSVAGYF-FGLIL 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 91/491 (19%)
slc5a7aXP_021332411.1 SLC5sbd_CHT 8..508 CDD:271368 90/490 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580022
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.