DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smvt and slc5a3a

DIOPT Version :9

Sequence 1:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_001153309.1 Gene:slc5a3a / 100004287 ZFINID:ZDB-GENE-090312-3 Length:671 Species:Danio rerio


Alignment Length:641 Identity:141/641 - (21%)
Similarity:246/641 - (38%) Gaps:155/641 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 FALVLSISAAIGVYFGFFA---KGEDTTEEYLMGGKRMKTIPIAISLVASQLSAISIMTIPAEMY 93
            |.|||.        ||||:   ....|...|.:.|:.|....|..||..|.:.:...:.:.....
Zfish    17 FVLVLC--------FGFFSMWRANRGTVSGYFLAGRSMNWFVIGASLFVSNIGSEHFIGLAGSGA 73

  Fly    94 AYGI---NWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRF-CRKVRV-LQTFIFILTM 153
            |.|:   .|.||.   :|::.||.::.|||:.::.:....|||..|| ..:::: ..:...:|.:
Zfish    74 ASGLAVGAWEFNA---ILLLQLLGWVFIPVYIHSGVYTMPEYLSKRFGGNRLKIYFASLTLLLYI 135

  Fly   154 FFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQAAIMVASVVLVG 218
            |..|.:.::..:|...:..|:|::|...::.::....|:.||:.||::||.:||.:|::..:.:.
Zfish   136 FTKLSVDLYSGALFIQESLGWNLYLSIILLITLTALLTVTGGLVAVIYTDTLQAFLMISGALCLM 200

  Fly   219 VLGAHRVGGFFEVLRIAGEGGRLDINY--------------------NFDLTTRSTI-----WNI 258
            .:...:||| .|.||........:|.:                    :|.| .||.:     |..
Zfish   201 AISLVKVGG-LEGLRTKYMNALPNITFITLENNLTYSNSCHVNPKADSFKL-LRSPLDKDLPWPA 263

  Fly   259 F----TSATMMWTGYVGLNQSCVQRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFH 319
            |    |.|: :|  |...:|..|||:::..::.||:.|.:|.|...:|.||.....|::....|.
Zfish   264 FLLGQTPAS-IW--YWCADQVIVQRVLAARNIAHAKGSTLLAGVLKVLPMFIIVIPGMISRVLFA 325

  Fly   320 D---------CDPIQSGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGG 375
            |         |..:.:......:...|..|.:.:.  .|:.|:.::.:.:|.:|.|.:..||...
Zfish   326 DELACIGPEHCMQVCNSRAGCTNTAYPRLVMNIMP--VGLRGLMMAVMLAALMSDLDSIFNSAST 388

  Fly   376 VVYFDYIKPHIRH--TEHRANVIMKLFVFFTGIYCILGGMVIENFNSILQVIYSIGGMSF----- 433
            :...|..| .|||  :.....|:.:|||..         :|..:...:..||...||..|     
Zfish   389 IFTLDIYK-MIRHQASSKELMVVGRLFVVL---------IVAISIAWVPFVIEMQGGQMFLYIQE 443

  Fly   434 ------GSTCGVFMLGMLVPKSHGRAALVGVLASIACMATIVILSWGRNHYDTLPTSTSACPASL 492
                  .....:|:||:|..:.:...|..|....:......:||::.....|.  .|....||  
Zfish   444 VSDYLTPPIAALFLLGVLWKRCNETGAFWGGFVGLILGIVRLILAFVYREPDC--DSVDDRPA-- 504

  Fly   493 NGTIKDIS---TASPLFLGSTTEAPVGEKEFSILDLSFNWYTVTGFVI----------------- 537
              .|||:.   .|:.||                      |  |:|||:                 
Zfish   505 --FIKDVHFMYVAAVLF----------------------W--VSGFVMVVVSLCTNPPSKEQISK 543

  Fly   538 TWLIGI-----PLSYILK----------SGPDYKPNPKLLSP---VVQPFVHYKLT 575
            |.|.|:     |.....|          .|.:::|.|..:.|   :..|..|.:.|
Zfish   544 TTLWGLRNRNQPADTKAKGGNGKLEQTLDGVEFQPLPPEMLPNGHLEAPHTHRQAT 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 133/599 (22%)
slc5a3aNP_001153309.1 SLC5-6-like_sbd 9..671 CDD:294310 141/641 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580028
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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