DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2187 and slc5a6b

DIOPT Version :9

Sequence 1:NP_001189331.1 Gene:CG2187 / 43743 FlyBaseID:FBgn0017448 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_005158632.1 Gene:slc5a6b / 796312 ZFINID:ZDB-GENE-050913-86 Length:603 Species:Danio rerio


Alignment Length:561 Identity:181/561 - (32%)
Similarity:302/561 - (53%) Gaps:48/561 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FGLTDYFVFVIMLGASAGIGVYFGFFSKSKNTTEEYLRGGKKMQTLPIAISLVASQLSGIAIMSI 88
            |.:.||.:|.::|.||..||:|:.|....::||:|:|...:.|:.||:::||:|:..|.:||:..
Zfish     9 FTVIDYVIFGLLLVASMSIGLYYAFTGGRQSTTQEFLIADRSMKCLPLSLSLMATFQSAVAIIGT 73

  Fly    89 PAESYTYGFNYIFVVLAMLVVIPILIYIIVPVFYENNVSNCYEYLEMRFNKRTRQLVTFFFVTNS 153
            |||.|.:|..|.|:..:.::.:.|..:|.:|:||..::::.|:|||:||.|..|...|..|:...
Zfish    74 PAEVYAHGTQYWFIGCSYVLGLLIPAHIFIPLFYRLHLTSVYQYLELRFCKAVRICGTVTFIFQM 138

  Fly   154 FLMLPVYMFIPSLAFAQVTGMNIHLINVMVSS--ICIFYTMLGGIKAVVWTDVVQGAIMLLSVVA 216
            .:.:.|.::.|:||...|||  .||...::::  :|..||.|||:||||||||.|..:|....:|
Zfish   139 VIYMGVGIYTPALALNAVTG--FHLWGAVLATGLVCTLYTALGGLKAVVWTDVFQTVVMFTGQLA 201

  Fly   217 VGVLGTIRSGGMFTVMERASDGGRFN-FDFGLDPRIRMTFWGATMGGIFMWTGHIGLNQSCVQRI 280
            |.::|..::||:.....:..||||.: .|...||.:|.|||...:||:|:.....|:||:.|||.
Zfish   202 VIIVGVHQAGGLSEAWGKVRDGGRISGIDLNPDPTVRHTFWTLAVGGVFLMLSLYGVNQAQVQRY 266

  Fly   281 VSLPSYSHAKKSLIVS--------GLGFLIISFFNTISGIIMFARYYGCDPMLAGLVSKPDKMMP 337
            :|    |..::..::|        .|..|:    :.:.|::|||.|....|:....::..|:|:.
Zfish   267 LS----SRTEREAVMSCYMVFPCLQLALLL----SCLMGLVMFACYGQNSPVEQQYITSKDQMVL 323

  Fly   338 FFVQDIMGHLAGMPGVFISCVFSAALSSLSATLNSLAGVVYFDYIKPRIRHTEARANWAMKLIVV 402
            :||.|::.:..|:||:|::|:|||:||::|:..||||.|...|.|||....|||||....||:.:
Zfish   324 YFVMDMLQNFPGLPGLFVACLFSASLSTISSAFNSLATVTMVDLIKPHYSMTEARATLLSKLLAL 388

  Fly   403 VMGGYCILGGFMVQNFN-SILQTVVTITGINTGAVVGVFLLGMFVPRCNAKTAVTSIIVSVVAMV 466
            ..|..|:...::|...| |:||..::|.|:..|.::|:|.||:|.|..|:..|||.:...::...
Zfish   389 SYGIICLAMAYLVHLMNSSVLQAALSIFGMIGGPLLGLFCLGIFFPCANSIGAVTGLSAGLLMAF 453

  Fly   467 WIIANGQMNFKSGLIKYEVLPNSLDQCEARGLYMIAEAINKTDFTPVTMKPPSGAPVTTAFHSD- 530
            |:...|.:.    .:...|:|                .:|.|...|...:..:.|  |....:| 
Zfish   454 WVGIGGFLT----RMPSPVIP----------------LLNSTITVPDVSENITAA--TAELEADS 496

  Fly   531 RDFSL---YDISFYWYKVLGSALVFLCAIPLSYIWRPDENE 568
            |...|   |.:|:.||..|.|..|.:..:.:|.|..|.:.:
Zfish   497 RSAGLHGFYSLSYMWYSALSSCTVLIVGLIISCITGPTKGD 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2187NP_001189331.1 SLC5sbd_NIS-SMVT 27..561 CDD:271383 178/549 (32%)
slc5a6bXP_005158632.1 SLC5-6-like_sbd 9..532 CDD:294310 180/554 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489472at33208
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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