DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2187 and Slc5a2

DIOPT Version :9

Sequence 1:NP_001189331.1 Gene:CG2187 / 43743 FlyBaseID:FBgn0017448 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_072112.2 Gene:Slc5a2 / 64522 RGDID:620217 Length:670 Species:Rattus norvegicus


Alignment Length:517 Identity:120/517 - (23%)
Similarity:202/517 - (39%) Gaps:144/517 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YFVFVIMLGASAGIGVYFGFFSKSKNTTEEYLRGGKKMQTLPIAISLVASQL------------- 80
            ||:.||      |:|:: ..|..::.|...|...|:.|...|:..||.||.:             
  Rat    30 YFLLVI------GVGLW-SMFRTNRGTVGGYFLAGRSMVWWPVGASLFASNIGSGHFVGLAGTGA 87

  Fly    81 -SGIAIMSIPAESYTYGFNYIFVVLAMLVVIPILIYIIVPVFYENNVSNCYEYLEMRFNKRTRQL 144
             ||:|:..       :.:|.:||||       :|.::.|||:....|....:||..||..|..:|
  Rat    88 ASGLAVAG-------FEWNALFVVL-------LLGWLFVPVYLTAGVITMPQYLRKRFGGRRIRL 138

  Fly   145 V-----TFFFVTNSFLMLPVYMFIPSLAFAQVTGMNIHLINVMVSSICIFYTMLGGIKAVVWTDV 204
            .     .|.::   |..:.|.||..::...|..|.||:...:.:..|.:.||:.||:.|:::||.
  Rat   139 YLSVLSLFLYI---FTKISVDMFSGAVFIQQALGWNIYASVIALLGITMIYTVTGGLAALMYTDT 200

  Fly   205 VQ------------------------------GAIMLLSVVAVGVLGTIRSGGMFTVMERASDGG 239
            ||                              ||:..|:|.....:|.|.|    |..:...|  
  Rat   201 VQTFVILAGAFILTGYAFHEVGGYSGLFDKYLGAVTSLTVSKDPAVGNISS----TCYQPRPD-- 259

  Fly   240 RFNFDFGLDPRIRMTFWGATMGGIFMWTG-HIGLNQSCVQRIVSLPSYSHAKKSLIVSGLGFLII 303
              ::....||......|.|.:.|:.:.:| :...:|..|||.::..:.:|.|...|:.|...|:.
  Rat   260 --SYHLLRDPVTGDLPWPALLLGLTIVSGWYWCSDQVIVQRCLAGKNLTHIKAGCILCGYLKLMP 322

  Fly   304 SFFNTISGIIMFARY-------------------YGCD----PMLAGLVSKPDKMMPFFVQDIMG 345
            .|...:.|:|....|                   .||.    |.|.      .|:||        
  Rat   323 MFLMVMPGMISRILYPDEVACVVPEVCKRVCGTEVGCSNIAYPRLV------VKLMP-------- 373

  Fly   346 HLAGMPGVFISCVFSAALSSLSATLNSLAGVVYFDY---IKPRIRHTE---ARANWAMKLIVVVM 404
              .|:.|:.::.:.:|.:|||::..||.:.:...|.   ::||....|   ....|.:.::.|.:
  Rat   374 --NGLRGLMLAVMLAALMSSLASIFNSSSTLFTMDIYTRLRPRAGDRELLLVGRLWVVFIVAVSV 436

  Fly   405 GGYCIL----GGFM---VQNFNSILQTVVTITGINTGAVVGVFLLGMFVPRCNAKTAVTSII 459
            ....::    ||.:   :|:.:|.|...|:          .||:|.:||||.|.|.|...:|
  Rat   437 AWLPVVQAAQGGQLFDYIQSVSSYLAPPVS----------AVFVLALFVPRVNEKGAFWGLI 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2187NP_001189331.1 SLC5sbd_NIS-SMVT 27..561 CDD:271383 120/517 (23%)
Slc5a2NP_072112.2 SLC5-6-like_sbd 22..670 CDD:382020 120/517 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340156
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

Return to query results.
Submit another query.