DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2187 and Slc5a2

DIOPT Version :10

Sequence 1:NP_651890.1 Gene:CG2187 / 43743 FlyBaseID:FBgn0017448 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_072112.2 Gene:Slc5a2 / 64522 RGDID:620217 Length:670 Species:Rattus norvegicus


Alignment Length:517 Identity:120/517 - (23%)
Similarity:202/517 - (39%) Gaps:144/517 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YFVFVIMLGASAGIGVYFGFFSKSKNTTEEYLRGGKKMQTLPIAISLVASQL------------- 80
            ||:.||      |:|:: ..|..::.|...|...|:.|...|:..||.||.:             
  Rat    30 YFLLVI------GVGLW-SMFRTNRGTVGGYFLAGRSMVWWPVGASLFASNIGSGHFVGLAGTGA 87

  Fly    81 -SGIAIMSIPAESYTYGFNYIFVVLAMLVVIPILIYIIVPVFYENNVSNCYEYLEMRFNKRTRQL 144
             ||:|:..       :.:|.:||||       :|.::.|||:....|....:||..||..|..:|
  Rat    88 ASGLAVAG-------FEWNALFVVL-------LLGWLFVPVYLTAGVITMPQYLRKRFGGRRIRL 138

  Fly   145 V-----TFFFVTNSFLMLPVYMFIPSLAFAQVTGMNIHLINVMVSSICIFYTMLGGIKAVVWTDV 204
            .     .|.::   |..:.|.||..::...|..|.||:...:.:..|.:.||:.||:.|:::||.
  Rat   139 YLSVLSLFLYI---FTKISVDMFSGAVFIQQALGWNIYASVIALLGITMIYTVTGGLAALMYTDT 200

  Fly   205 VQ------------------------------GAIMLLSVVAVGVLGTIRSGGMFTVMERASDGG 239
            ||                              ||:..|:|.....:|.|.|    |..:...|  
  Rat   201 VQTFVILAGAFILTGYAFHEVGGYSGLFDKYLGAVTSLTVSKDPAVGNISS----TCYQPRPD-- 259

  Fly   240 RFNFDFGLDPRIRMTFWGATMGGIFMWTG-HIGLNQSCVQRIVSLPSYSHAKKSLIVSGLGFLII 303
              ::....||......|.|.:.|:.:.:| :...:|..|||.::..:.:|.|...|:.|...|:.
  Rat   260 --SYHLLRDPVTGDLPWPALLLGLTIVSGWYWCSDQVIVQRCLAGKNLTHIKAGCILCGYLKLMP 322

  Fly   304 SFFNTISGIIMFARY-------------------YGCD----PMLAGLVSKPDKMMPFFVQDIMG 345
            .|...:.|:|....|                   .||.    |.|.      .|:||        
  Rat   323 MFLMVMPGMISRILYPDEVACVVPEVCKRVCGTEVGCSNIAYPRLV------VKLMP-------- 373

  Fly   346 HLAGMPGVFISCVFSAALSSLSATLNSLAGVVYFDY---IKPRIRHTE---ARANWAMKLIVVVM 404
              .|:.|:.::.:.:|.:|||::..||.:.:...|.   ::||....|   ....|.:.::.|.:
  Rat   374 --NGLRGLMLAVMLAALMSSLASIFNSSSTLFTMDIYTRLRPRAGDRELLLVGRLWVVFIVAVSV 436

  Fly   405 GGYCIL----GGFM---VQNFNSILQTVVTITGINTGAVVGVFLLGMFVPRCNAKTAVTSII 459
            ....::    ||.:   :|:.:|.|...|:          .||:|.:||||.|.|.|...:|
  Rat   437 AWLPVVQAAQGGQLFDYIQSVSSYLAPPVS----------AVFVLALFVPRVNEKGAFWGLI 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2187NP_651890.1 SLC5sbd_NIS-SMVT 27..561 CDD:271383 120/517 (23%)
Slc5a2NP_072112.2 SLC5-6-like_sbd 22..670 CDD:444915 120/517 (23%)

Return to query results.
Submit another query.