DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2187 and slc5a3b

DIOPT Version :9

Sequence 1:NP_001189331.1 Gene:CG2187 / 43743 FlyBaseID:FBgn0017448 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_005167848.1 Gene:slc5a3b / 568338 ZFINID:ZDB-GENE-070912-43 Length:709 Species:Danio rerio


Alignment Length:635 Identity:130/635 - (20%)
Similarity:238/635 - (37%) Gaps:159/635 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YFVFVIMLGASAGIGVYFGFFSKSKNTTEEYLRGGKKMQTLPIAISLVASQLSGIAIMSIPAESY 93
            |||.|:::|..|       .:..:.:|...|...|:.|....|..||..|.:.....:.:.....
Zfish    19 YFVLVLVIGLLA-------MWKANHSTVSGYFLAGRTMNWAVIGASLFVSNIGSEHFIGLAGSGA 76

  Fly    94 TYGFNYIFVVLAMLVVIPILIYIIVPVFYENNVSNCYEYLEMRF-NKRTRQLVTFFFVTNSFLM- 156
            ..||.........|:::.:|.::.:||:..:.|....|||..|: .||.:    .:|...|.|: 
Zfish    77 ASGFAVAAWEFNALLLLQLLGWVFIPVYIHSGVYTMPEYLSKRYGGKRLK----IYFAGLSLLLY 137

  Fly   157 ----LPVYMFIPSLAFAQVTGMNIHLINVMVSSICIFYTMLGGIKAVVWTDVVQGAIMLLSVVAV 217
                |.|.::..:|...:..|.|::|..:::.|:....|:.||:.||::||.:|..:|:...:.:
Zfish   138 IFTKLSVDLYAGALFIQESLGWNLYLSIILLISMTALLTVTGGLVAVIYTDTLQAVLMIGGALTL 202

  Fly   218 GVLGTIRSGGMFTVMERASD----------GGRFNFDF------------------GLDPRIRMT 254
            .::..|:.||:..|.|:..:          ...|:|::                  .||..|.  
Zfish   203 TIISLIKVGGLEGVREKYMEAVPNVTAILASSNFSFEYTNSCRIYPKPDSLKLLRGPLDEDIP-- 265

  Fly   255 FW-----GATMGGIFMWTGHIGLNQSCVQRIVSLPSYSHAKKSLIVSGLGFLIISFFNTISGI-- 312
             |     |.|...|:.|..    :|..|||:::..:.:|||.|.:::|:..::..|...|.|:  
Zfish   266 -WPGFLLGQTPSSIWYWCA----DQVIVQRVLAAKNIAHAKGSTLMAGVLKILPMFIIVIPGMIS 325

  Fly   313 -IMFARYYGCDPMLAGLVSKPDKMM--------------PFFVQDIMGHLAGMPGVFISCVFSAA 362
             |:|.....|        ..|:..|              |..|..:|.  .|:.|:.::.:.:|.
Zfish   326 RILFPDELAC--------IGPEHCMAVCGSQAGCSNIAYPRLVMSVMP--VGLRGLMMAVMIAAL 380

  Fly   363 LSSLSATLNSLAGVVYFDYIKPRIRHTEARANWAMKLIVVVMGGYCILGGFMVQNFNSILQTVV- 426
            :|.|.:..||.:.:...|..|.......:|.       :||:|...::  |||....:.:..:: 
Zfish   381 MSDLDSIFNSASTIFTLDIYKMLRARASSRE-------LVVIGRIFVI--FMVAISIAWVPVIIE 436

  Fly   427 -----------TITGINTGAVVGVFLLGMFVPRCNAKTAVTSIIVSVVAMVWIIANGQMNFKSG- 479
                       .:.|..|..:..:||||:|..|||.              :.....|...|..| 
Zfish   437 MQGGQMYLYIQEVAGYLTPPIAALFLLGVFWKRCNE--------------IGAFCGGMTGFVLGT 487

  Fly   480 ---LIKYEVLPNSLDQCEARGLYMIAEAINKTDFTPVTMKPPSGAPVTTAFHSDRDFSLYDISFY 541
               |:.:.......||.:.|..::                        |..|    :.......:
Zfish   488 TRLLLGFIYREPKCDQPDERPAFI------------------------TRIH----YMYIAAGLF 524

  Fly   542 WYKVLGSALVFLCAIPLSYIWRPDENEKQNPKLYSPFVRKFLSLPVTDQD 591
            |...|.:.:|.||..|      |||...:...::.  :||...|.||:::
Zfish   525 WISGLVAVVVSLCTTP------PDEERIKRTTMWG--LRKLRRLVVTERE 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2187NP_001189331.1 SLC5sbd_NIS-SMVT 27..561 CDD:271383 122/603 (20%)
slc5a3bXP_005167848.1 SLC5-6-like_sbd 12..709 CDD:294310 130/635 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580023
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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