DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2187 and Smvt

DIOPT Version :10

Sequence 1:NP_651890.1 Gene:CG2187 / 43743 FlyBaseID:FBgn0017448 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster


Alignment Length:596 Identity:311/596 - (52%)
Similarity:412/596 - (69%) Gaps:23/596 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTTTTTTTTMASAVSSASQDLRFGLTDYFVFVIMLGASAGIGVYFGFFSKSKNTTEEYLRGGKK 65
            ||:....|....:|.........|..|||.||.::|..||.||||||||:|.::||||||.|||:
  Fly     1 MSSLLNATVLATAATVVPDSQFVFNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKR 65

  Fly    66 MQTLPIAISLVASQLSGIAIMSIPAESYTYGFNYIFVVLAMLVVIPILIYIIVPVFYENNVSNCY 130
            |:|:||||||||||||.|:||:||||.|.||.|::|.|:.|::|:|:|.|:::||||.||::|||
  Fly    66 MKTIPIAISLVASQLSAISIMTIPAEMYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCY 130

  Fly   131 EYLEMRFNKRTRQLVTFFFVTNSFLMLPVYMFIPSLAFAQVTGMNIHLINVMVSSICIFYTMLGG 195
            |||||||.::.|.|.||.|:...|.|||:::|:||||||||||.|:||||.:|.|||:||||.||
  Fly   131 EYLEMRFCRKVRVLQTFIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGG 195

  Fly   196 IKAVVWTDVVQGAIMLLSVVAVGVLGTIRSGGMFTVMERASDGGRFNFDFGLDPRIRMTFWGATM 260
            |||||||||:|.|||:.|||.|||||..|.||.|.|:..|.:|||.:.::..|...|.|.|....
  Fly   196 IKAVVWTDVIQAAIMVASVVLVGVLGAHRVGGFFEVLRIAGEGGRLDINYNFDLTTRSTIWNIFT 260

  Fly   261 GGIFMWTGHIGLNQSCVQRIVSLPSYSHAKKSLIVSGLGFLIISFFNTISGIIMFARYYGCDPML 325
            ....||||::|||||||||||||||..||::||::.|.||::|.|||..:||::::|::.|||:.
  Fly   261 SATMMWTGYVGLNQSCVQRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHDCDPIQ 325

  Fly   326 AGLVSKPDKMMPFFVQDIMGHLAGMPGVFISCVFSAALSSLSATLNSLAGVVYFDYIKPRIRHTE 390
            :|.|||.|||:|:||||.:|:|.||||||||||||||||:|||::|||.||||||||||.|||||
  Fly   326 SGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIKPHIRHTE 390

  Fly   391 ARANWAMKLIVVVMGGYCILGGFMVQNFNSILQTVVTITGINTGAVVGVFLLGMFVPRCNAKTAV 455
            .|||..|||.|...|.||||||.:::|||||||.:.:|.|::.|:..|||:|||.||:.:.:.|:
  Fly   391 HRANVIMKLFVFFTGIYCILGGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAAL 455

  Fly   456 TSIIVSVVAMVWIIANGQMNFKSGLIKYEVLPNSLDQCEARGLYMIAEAINKT-----DFTPVTM 515
            ..::.|:..|..|:.     ...|...|:.||.|...|.|        ::|.|     ..:|:.:
  Fly   456 VGVLASIACMATIVI-----LSWGRNHYDTLPTSTSACPA--------SLNGTIKDISTASPLFL 507

  Fly   516 KPPSGAPVTTAFHSDRDFSLYDISFYWYKVLGSALVFLCAIPLSYIWRPDENEKQNPKLYSPFVR 580
            ...:.|||     .:::||:.|:||.||.|.|..:.:|..||||||.:...:.|.||||.||.|:
  Fly   508 GSTTEAPV-----GEKEFSILDLSFNWYTVTGFVITWLIGIPLSYILKSGPDYKPNPKLLSPVVQ 567

  Fly   581 KFLSLPVTDQD 591
            .|:...:|..|
  Fly   568 PFVHYKLTPSD 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2187NP_651890.1 SLC5sbd_NIS-SMVT 27..561 CDD:271383 293/538 (54%)
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 293/538 (54%)

Return to query results.
Submit another query.