DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2187 and RGD1563815

DIOPT Version :9

Sequence 1:NP_001189331.1 Gene:CG2187 / 43743 FlyBaseID:FBgn0017448 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_006256382.1 Gene:RGD1563815 / 365549 RGDID:1563815 Length:695 Species:Rattus norvegicus


Alignment Length:539 Identity:111/539 - (20%)
Similarity:214/539 - (39%) Gaps:122/539 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TTTTTTMASAVSSASQDLRFGLTDYFVFVIMLGASAGIGVYFGFFSKSKNTTEEYLRGGKKMQTL 69
            |...:|:..::.|....|  .:|.|.:.|:.:|       .:...|.|:.|.:::...|:.:...
  Rat    11 TWNHSTLGLSIHSTVDTL--VMTFYLLLVLCIG-------LWALLSHSRGTIKDFFLAGQNLAWW 66

  Fly    70 PIAISLVASQL--------------SGIAIMSIPAESYTYGFNYIFVVLAMLVVIPILIYIIVPV 120
            .:.:|:.:|.:              ||||:.:       :.:|.:|::.       :|.:|.||:
  Rat    67 LMGLSIYSSTVGSGHFMGLAGIGAASGIAVGA-------FEWNTVFMLF-------MLGWIFVPI 117

  Fly   121 FYENNVSNCYEYLEMRFNKRTRQLVTFFFVTNSFLMLPVYMF--------IPSLAFAQVTGMNIH 177
            :.:..|....|||:.||.....||   ||   ||:.|.||:.        ..::....|..::|:
  Rat   118 YSKAGVVTLPEYLKKRFGSVRIQL---FF---SFVFLIVYILSRISMEIGFGAMFLKMVWDIDIY 176

  Fly   178 LINVMVSSICIFYTMLGGIKAVVWTDVVQGAIMLLSVVAVGVLGTIRSGGMFTVMERASDGGRFN 242
            ...:.|.:|...||:.||:..|.:.:.:|..||:|....:........||...::.:.|.     
  Rat   177 QTMLTVLTITGVYTITGGLATVAYVETLQAGIMVLGSALLMGYAFYEVGGYQELVNKYSK----- 236

  Fly   243 FDFGLDPRIRMTFWGA-----------------TMGGIFMWTG------HIGLNQSC-----VQR 279
               .:...|:...|.|                 .:.|...|.|      .:.|...|     |||
  Rat   237 ---AIPSTIQQGNWTAKPECYTPREDAFHVFRSCVSGDVPWPGLVLGATTVSLFYGCADQVSVQR 298

  Fly   280 IVSLPSYSHAKKSLIVSGLGFLIISFFNTISGIIMFARYYGCDPMLAGLVSKPDKM--------- 335
            .::..|..|.:...::.|...|:..|...:.|  |.:|....|.:...:.|:.:|.         
  Rat   299 FLAGKSRLHMEGGCLLCGYLKLLPMFLMVMPG--MISRVLFPDQVACVVPSECEKFCGRGTGCSA 361

  Fly   336 --MPFFVQDIMGHLAGMPGVFISCVFSAALSSLSATLNSLAGVV---YFDYIKPRIRHTEARANW 395
              .|..|..:|.  :|:.|..:|.|.::.:|||::..||.:.:.   .:.:|:|..  ||.....
  Rat   362 LAYPVLVLGVMP--SGLQGFMLSTVCASLMSSLTSIFNSSSALFTLNIYTWIRPTA--TEKELMI 422

  Fly   396 AMKLIVVVMGGYCILGGFMVQ--------NFNSILQTVVTITGINTGAVVGVFLLGMFVPRCNAK 452
            |.:..|:::....|:...:::        .:..||::.:      |.:|..||||.:|..|.|.:
  Rat   423 AGRFFVIILLAVTIVWIPIIEMAPSETLFEYMQILKSCL------TPSVTAVFLLAVFCKRVNEQ 481

  Fly   453 TAVTSIIV-SVVAMVWIIA 470
            .|...:|: |.:.:..::|
  Rat   482 GAFWGLILGSTIGVFRLLA 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2187NP_001189331.1 SLC5sbd_NIS-SMVT 27..561 CDD:271383 107/517 (21%)
RGD1563815XP_006256382.1 SLC5-6-like_sbd 26..695 CDD:294310 108/524 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340163
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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