DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2187 and Slc5a10

DIOPT Version :9

Sequence 1:NP_001189331.1 Gene:CG2187 / 43743 FlyBaseID:FBgn0017448 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001100477.1 Gene:Slc5a10 / 303205 RGDID:1305232 Length:596 Species:Rattus norvegicus


Alignment Length:510 Identity:114/510 - (22%)
Similarity:205/510 - (40%) Gaps:110/510 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TDYFVFVIMLGASAGIGVYFGFFSKSKNTTEEYLRGGKKMQTLPIAISLVASQ------------ 79
            :|..|..:....:..:||:.. ...:|||...|...|:.|...||..||.||.            
  Rat    19 SDIIVISLYFALNVAVGVWTA-CRANKNTVSGYFLAGRDMAWWPIGASLFASSEGSGLFIGLAGS 82

  Fly    80 --LSGIAIMSIPAESYTYGFNYIFVVLAMLVVIPILIYIIVPVFYENNVSNCYEYLEMRF-NKRT 141
              ..|:|:..       :.:|..:|:||       |.::.||::..:.:....||::.|| .:|.
  Rat    83 GAAGGLAVAG-------FEWNATYVLLA-------LAWVFVPIYVSSEIVTLPEYIQKRFGGQRI 133

  Fly   142 RQ-LVTFFFVTNSFLMLPVYMFIPSLAFAQVTGMNIHLINVMVSSICIFYTMLGGIKAVVWTDVV 205
            |. |.....:.:.|..:.:.::..:|......|.|.:|..::..:|...||:.||:..|::||.:
  Rat   134 RMYLSVLSLLLSVFTKISIDLYAGALFVHICLGWNFYLSTILTLAITALYTIAGGLATVIYTDAL 198

  Fly   206 QGAIMLLSVVAVGVLGTIRSGGMFTV-------------------MERASDGGRFNFDFGLDPRI 251
            |.|||::..|.:.|....:.||...:                   :.||.....|.     ||..
  Rat   199 QTAIMVVGAVILAVKAFNQIGGYEQLEAAYAQATPSRTIPNTTCHLPRADAMHMFR-----DPST 258

  Fly   252 RMTFW-GATMGGIFMWTGHIGLNQSCVQRIVSLPSYSHAKKSLIVSGLGFLIISFFNTISGIIMF 315
            ....| |.|.|...|.|.:...:|..|||.:|..:.:|||       .|.::.|:...:...:| 
  Rat   259 GDLPWTGMTFGLTIMATWYWCTDQVIVQRSLSARNLNHAK-------AGSILASYLKMLPMGLM- 315

  Fly   316 ARYYGCDPMLAGLVSK---PDKM----------------------MPFFVQDIMGHLAGMPGVFI 355
                    ::.|::|:   ||.:                      .|..|.::|.  .|:.|:.|
  Rat   316 --------IMPGMISRVLFPDDVGCVVPSECLRACGAEIGCSNIAYPKLVMELMP--IGLRGLMI 370

  Fly   356 SCVFSAALSSLSATLNSLAGVVYFD---YIKPRIRHTEARANWAMKLIVVVMGGYCILGGFMVQN 417
            :.:.:|.||||::..||.:.:...|   ..:|.....|...  ..:|::||:.|..:....::|.
  Rat   371 AVMMAALLSSLTSIFNSSSTLFTMDIWRQFRPGAGERELLL--VGRLVIVVLVGVSVAWIPVLQG 433

  Fly   418 FNS--ILQTVVTITGINTGAVVGVFLLGMFVPRCNAKTA----VTSIIVSVVAMV 466
            .||  :...:.::|......|..:||||:|..|.|.:.|    :..::|..:.:|
  Rat   434 SNSGQLFIYMQSVTSSLAPPVTAIFLLGIFWRRANEQGAFWGLMAGLLVGALRLV 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2187NP_001189331.1 SLC5sbd_NIS-SMVT 27..561 CDD:271383 114/510 (22%)
Slc5a10NP_001100477.1 SLC5-6-like_sbd 17..596 CDD:294310 114/510 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340174
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.