DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2187 and Slc5a4b

DIOPT Version :10

Sequence 1:NP_651890.1 Gene:CG2187 / 43743 FlyBaseID:FBgn0017448 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_008771154.1 Gene:Slc5a4b / 294342 RGDID:1309867 Length:660 Species:Rattus norvegicus


Alignment Length:619 Identity:136/619 - (21%)
Similarity:245/619 - (39%) Gaps:128/619 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTTTTTTTTMASAVSSASQDLRFGLTDYFVFVIMLGASAGIGVYFGFFSKSKNTTEEYLRGGKK 65
            :|.:|...|.....||...|:    ..|..|.||.......:|:: .....::.|...:...|:.
  Rat     5 LSPSTAPRTEEPPEVSERIQN----AADISVIVIYFLVVLAVGLW-SMVRSNRGTIGGFFLAGRD 64

  Fly    66 MQTLPIAISLVASQL--------------SGIAIMSIPAESYTYGFNYIFVVLAMLVVIPILIYI 116
            :...|:..||.||.:              |||||.::.       :|.:.:||       :|.::
  Rat    65 VSWWPMGASLFASNIGSNHFVGLAGTGAASGIAIAAVE-------WNALLMVL-------VLGWV 115

  Fly   117 IVPVFYENNVSNCYEYLEMRFNKRTRQLVTFFFVTNSFLMLPVY----MFIPSLAFAQVTGMNIH 177
            .||::.:..|:...|||..||..:..|:  :..|.:.|:|:.:.    :|..::......|:|::
  Rat   116 FVPIYIKAGVTTMPEYLRKRFGGKRLQI--YLSVLSLFIMVAIQTSSTIFSGAIFIQLALGLNLY 178

  Fly   178 LINVMVSSICIFYTMLGGIKAVVWTDVVQGAIMLL-SVVAVG------------------VLGTI 223
            |...::.:|..|||:.||:.:|::||.||..|||: |::.:|                  .:.::
  Rat   179 LAVFILLAITAFYTVAGGLASVIYTDSVQTFIMLVGSLILMGFAFAEVGGYESFTEKYMNAIPSV 243

  Fly   224 RSGGMFTVMERASDGGRFNFDFGLDPRIRMTFW-----GATMGGIFMWTGHIGLNQSCVQRIVSL 283
            ..|...|:..:.......:|....||......|     |.|:..|:.|..    :|..|||.:..
  Rat   244 VEGDNLTISPKCYTPQPDSFHIFRDPINGDIPWPGLIFGMTILAIWYWCA----DQVMVQRCLCG 304

  Fly   284 PSYSHAKKSLIVSGLGFLIISFFNTISGIIMFARYYG---------CDPMLAGLVSKPDKMMPFF 339
            .:.||.|.:.|:.|...|:..|...:.|:|....|..         |.......|...:...|..
  Rat   305 KNMSHVKAACIMCGYLKLLPMFLMVMPGMISRILYTDKVACVVPSECVKQCGTAVGCTNYAYPTL 369

  Fly   340 VQDIMGHLAGMPGVFISCVFSAALSSLSATLNSLAGVVYFD-YIKPRIRHTEARANWAMKLIVVV 403
            |.::|..  |:.|:.:|.:.::.:|||::..||.:.:...| |.|.|.:.:|.....|.::..:|
  Rat   370 VLELMPD--GLRGLMLSVMLASLMSSLTSIFNSASTLFTMDLYTKIRKKASERELMVAGRVFGIV 432

  Fly   404 MGGYCILGGFMVQ-NFNSILQTVVTITGINTGAVVG-VFLLGMFVPRCNAKTAVTSIIVSVVAMV 466
            :....||...::| :.|..|...::......|..|| ||||.:|..|.|.:.|...::|.:|.  
  Rat   433 LIVISILWVPLIQASQNGQLFHYISSFSSYIGPPVGAVFLLAIFCKRVNEQGAFWGLMVGLVI-- 495

  Fly   467 WIIANGQMNFKSGLIKYEVLPNSLDQCEARGLYMIAEAINKTDFTPVTMKPPSGAP-VTTAFHSD 530
                        |||:                 ||.|.|..|.    :...||..| :....|  
  Rat   496 ------------GLIR-----------------MITEFIYGTG----SCLEPSNCPRIICGVH-- 525

  Fly   531 RDFSLYDISFYWYKVLGSALVFLCAIPLSYIWRP 564
                     :.::.::...:..|..:.:|::..|
  Rat   526 ---------YMYFAIILFFVSILVILGVSFLTEP 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2187NP_651890.1 SLC5sbd_NIS-SMVT 27..561 CDD:271383 129/588 (22%)
Slc5a4bXP_008771154.1 SLC5-6-like_sbd 27..660 CDD:444915 130/593 (22%)

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