DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2187 and smvt-1

DIOPT Version :10

Sequence 1:NP_651890.1 Gene:CG2187 / 43743 FlyBaseID:FBgn0017448 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001360058.2 Gene:smvt-1 / 186132 WormBaseID:WBGene00018716 Length:565 Species:Caenorhabditis elegans


Alignment Length:595 Identity:150/595 - (25%)
Similarity:277/595 - (46%) Gaps:78/595 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 FVIMLGASAGIGVYFGFFSKSKNTTEEY----LRGGKKMQTLPIAISLVASQLSGIAIMSIPAES 92
            :|.:|.....|..| ||....|...||.    ...|.::......:|:.:..:|.|:::..|||.
 Worm     6 YVTLLTCLISISAY-GFIKSRKTENEEQSVHATMVGSRVSVWSATLSVCSGFISSISLLGFPAEI 69

  Fly    93 YTYGFNYIFVVLAMLVVIPILIYIIVPVFYENNVSNCYEYLEMRFNKRTRQLVTFFFVTNSFLML 157
            |..|...::.....::..||:.::.:||.|...::..|||.|.||:.:.|.:.|..|.....|..
 Worm    70 YYQGGMMLWFAPMYVISFPIVAFVFLPVLYRLKLTTIYEYFERRFDYKCRFVTTSLFCVQMILYN 134

  Fly   158 PVYMFIPSLAFAQVTGMNIHLINVMVSSICIFYTMLGGIKAVVWTDVVQGAIMLLSVVAVGVLGT 222
            .|.::.||||.|.:|.:.|.:..::.:.:..||..:||:||.:.|..:|..::.|::..: :..:
 Worm   135 SVALYAPSLAIASITNIPITVSILITAVLSAFYISVGGVKAGIHTSAIQMLLIFLTMTFI-ISIS 198

  Fly   223 IRSGGMFTVMERASDGGRFNF-DFGLDPRIRMTFWGATMGGIFMWTGHI----GLNQSCVQRIVS 282
            :|...:..|......|.||.. ||.::|.||.:.|...:||    ||:|    ..||..:||.::
 Worm   199 LREMSIHDVYTSVVHGKRFILNDFRINPTIRHSVWSLLIGG----TGNILALFAANQLSIQRYMA 259

  Fly   283 LPSYSHAKKSLIVSGL--GFLIISFFNTISGIIMFARYYGCDPMLAGLVSKPDKMMPFFVQDIMG 345
            :.:...|:|.::::.:  ..:::|:.:.  |.:::|.|..|.|.    :...::::|.||.|:..
 Worm   260 MDTLKSAQKVVLLNIVCNTIILVSYVSV--GFLIYAHYKDCHPQ----IGNANELLPRFVMDVTS 318

  Fly   346 HLAGMPGVFISCVFSAALSSLSATLNSLAGVVYFD----YIKPR----IRHTEARANWAMKLIVV 402
            ...|..|:|.:.|:||.:|:|||:..:::.:|..|    |.:.|    :|:.:.:.  ||:::.:
 Worm   319 KYPGSVGLFAAAVYSAGISTLSASFTAVSSIVINDVWKVYRERRKMAPLRNDQVQN--AMRILPI 381

  Fly   403 VMGGYCILGGFMVQNFNS-ILQTVVTITGINTGAVVGVFLLGMFVPRCNAKTAVTSIIVSVVAMV 466
            |:....|...|:.....| |||....:.|...|.|:|.|::|:||||...|.|:..:|.|::...
 Worm   382 VLSFISIFVAFLCSMLQSIILQVSFIVFGAGGGPVLGSFVVGLFVPRVKEKAALVGLIGSIIVCF 446

  Fly   467 WIIANGQMNFKSGLIKYEVLPNSLDQCEARGL-YMIAEAINKTDFTPVTMKPPSGAPVTTAFHSD 530
                  .::..|.|:|.:.:...|.||..:.| |.....|.....||:            .|..:
 Worm   447 ------SISIGSVLVKVKPVALELGQCSNQTLTYFDESFIGAVTSTPL------------VFGLE 493

  Fly   531 RDFSLYDISFYWYKVLG-----------SALVFLCAIPLSYIWRPDENEKQNPKL-YSPFVRKFL 583
            |.|:   ||:.:|.::.           ..|..||::..:::  |..:|..:|.| ||...|   
 Worm   494 RIFA---ISYQYYSIIAVVTNVALSIVMQKLFELCSLTANHL--PVSHELVSPLLTYSSSKR--- 550

  Fly   584 SLPVTDQDLE 593
                 |.:||
 Worm   551 -----DPELE 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2187NP_651890.1 SLC5sbd_NIS-SMVT 27..561 CDD:271383 140/560 (25%)
smvt-1NP_001360058.2 SLC5sbd_NIS-SMVT 5..521 CDD:271383 137/549 (25%)

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