DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2187 and F52H2.4

DIOPT Version :9

Sequence 1:NP_001189331.1 Gene:CG2187 / 43743 FlyBaseID:FBgn0017448 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001360058.1 Gene:F52H2.4 / 186132 WormBaseID:WBGene00018716 Length:491 Species:Caenorhabditis elegans


Alignment Length:516 Identity:132/516 - (25%)
Similarity:246/516 - (47%) Gaps:73/516 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 LVVIPILIYIIVPVFYENNVSNCYEYLEMRFNKRTRQLVTFFFVTNSFLMLPVYMFIPSLAFAQV 171
            ::..||:.::.:||.|...::..|||.|.||:.:.|.:.|..|.....|...|.::.||||.|.:
 Worm    10 VISFPIVAFVFLPVLYRLKLTTIYEYFERRFDYKCRFVTTSLFCVQMILYNSVALYAPSLAIASI 74

  Fly   172 TGMNIHLINVMVSSICIFYTMLGGIKAVVWTDVVQGAIMLLSVVAVGVLGTIRSGGMFTVMERAS 236
            |.:.|.:..::.:.:..||..:||:||.:.|..:|..::.|::..: :..::|...:..|.....
 Worm    75 TNIPITVSILITAVLSAFYISVGGVKAGIHTSAIQMLLIFLTMTFI-ISISLREMSIHDVYTSVV 138

  Fly   237 DGGRFNF-DFGLDPRIRMTFWGATMGGIFMWTGHI----GLNQSCVQRIVSLPSYSHAKKSLIVS 296
            .|.||.. ||.::|.||.:.|...:||    ||:|    ..||..:||.:::.:...|:|.::::
 Worm   139 HGKRFILNDFRINPTIRHSVWSLLIGG----TGNILALFAANQLSIQRYMAMDTLKSAQKVVLLN 199

  Fly   297 GL--GFLIISFFNTISGIIMFARYYGCDPMLAGLVSKPDKMMPFFVQDIMGHLAGMPGVFISCVF 359
            .:  ..:::|:.:.  |.:::|.|..|.|.    :...::::|.||.|:.....|..|:|.:.|:
 Worm   200 IVCNTIILVSYVSV--GFLIYAHYKDCHPQ----IGNANELLPRFVMDVTSKYPGSVGLFAAAVY 258

  Fly   360 SAALSSLSATLNSLAGVVYFD----YIKPR----IRHTEARANWAMKLIVVVMGGYCILGGFMVQ 416
            ||.:|:|||:..:::.:|..|    |.:.|    :|:.:.:.  ||:::.:|:....|...|:..
 Worm   259 SAGISTLSASFTAVSSIVINDVWKVYRERRKMAPLRNDQVQN--AMRILPIVLSFISIFVAFLCS 321

  Fly   417 NFNS-ILQTVVTITGINTGAVVGVFLLGMFVPRCNAKTAVTSIIVSVVAMVWIIANGQMNFKSGL 480
            ...| |||....:.|...|.|:|.|::|:||||...|.|:..:|.|::...      .::..|.|
 Worm   322 MLQSIILQVSFIVFGAGGGPVLGSFVVGLFVPRVKEKAALVGLIGSIIVCF------SISIGSVL 380

  Fly   481 IKYEVLPNSLDQCEARGL-YMIAEAINKTDFTPVTMKPPSGAPVTTAFHSDRDFSLYDISFYWYK 544
            :|.:.:...|.||..:.| |.....|.....||:            .|..:|.|:   ||:.:|.
 Worm   381 VKVKPVALELGQCSNQTLTYFDESFIGAVTSTPL------------VFGLERIFA---ISYQYYS 430

  Fly   545 VLG-----------SALVFLCAIPLSYIWRPDENEKQNPKL-YSPFVRKFLSLPVTDQDLE 593
            ::.           ..|..||::..:::  |..:|..:|.| ||...|        |.:||
 Worm   431 IIAVVTNVALSIVMQKLFELCSLTANHL--PVSHELVSPLLTYSSSKR--------DPELE 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2187NP_001189331.1 SLC5sbd_NIS-SMVT 27..561 CDD:271383 122/481 (25%)
F52H2.4NP_001360058.1 SLC5-6-like_sbd 1..447 CDD:382020 119/470 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG29060
OrthoDB 1 1.010 - - D1180002at2759
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 1 1.000 - - otm14518
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.830

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