DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2187 and Slc5a6

DIOPT Version :9

Sequence 1:NP_001189331.1 Gene:CG2187 / 43743 FlyBaseID:FBgn0017448 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_570102.1 Gene:Slc5a6 / 170551 RGDID:69648 Length:634 Species:Rattus norvegicus


Alignment Length:610 Identity:188/610 - (30%)
Similarity:300/610 - (49%) Gaps:64/610 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 STTTTTTTTMASAVSSASQDLRFGLTDYFVFVIMLGASAGIGVYFGFFSKSKNTTEEYLRGGKKM 66
            |.||:.|..:.|.         |.:.||.||.::|..|..||:|.......::|..|.|...:||
  Rat    10 SYTTSDTNRVIST---------FSVVDYVVFGLLLVLSLVIGLYHACRGWGRHTVGELLMADRKM 65

  Fly    67 QTLPIAISLVASQLSGIAIMSIPAESYTYGFNYIFVVLAMLVVIPILIYIIVPVFYENNVSNCYE 131
            ..||:|:||:|:..|.:||:..|||.|.:|..|.|:..:..:.:.|..:|.:||||..::::.||
  Rat    66 GCLPVALSLLATFQSAVAILGGPAEIYRFGTQYWFLGCSYFLGLLIPAHIFIPVFYRLHLTSAYE 130

  Fly   132 YLEMRFNKRTRQLVTFFFVTNSFLMLPVYMFIPSLAFAQVTGMNIHLINVMVSSICIFYTMLGGI 196
            |||:||||..|...|..|:....:.:.|.::.||||...|||.::.|..:.:..:|..||.|||:
  Rat   131 YLELRFNKAVRICGTVTFIFQMVVYMGVALYAPSLALNAVTGFDLWLSVLALGIVCNIYTALGGL 195

  Fly   197 KAVVWTDVVQGAIMLLSVVAVGVLGTIRSGGMFTVMERASDGGRFN-FDFGLDPRIRMTFWGATM 260
            |||:||||.|..||.|..:.|.::|..:.||:..|...||..|..: .:...||.:|.|||....
  Rat   196 KAVIWTDVFQTLIMFLGQLVVIIVGAAKVGGLGHVWAVASQHGLISGIELDPDPFVRHTFWTLAF 260

  Fly   261 GGIFMWTGHIGLNQSCVQRIVSLPSYSHAKKSLIVSGLGFL----IISFFNTISGIIMFARY--Y 319
            ||:||.....|:||:.|||.:|    ||::|:.::|.....    :....:.:.|::|||.|  |
  Rat   261 GGVFMMLSLYGVNQAQVQRYLS----SHSEKAAVLSCYAVFPCQQVALCMSCLIGLVMFAYYKKY 321

  Fly   320 GCDPMLAGLVSKPDKMMPFFVQDIMGHLAGMPGVFISCVFSAALSSLSATLNSLAGVVYFDYIKP 384
            ...|...  .:.||:::.:||.|::..:.|:||:|::|:||.:||::|:..||||.|...|.|:|
  Rat   322 SMSPQQE--QAAPDQLVLYFVMDLLKDMPGLPGLFVACLFSGSLSTISSAFNSLATVTMEDLIQP 384

  Fly   385 RI-RHTEARANWAMKLIVVVMGGYCILGGFMVQNFNSILQTVVTITGINTGAVVGVFLLGMFVPR 448
            .. :.||.||....:.:....|..|:...::..:..|:||..::|.|:..|.::|:|.||||.|.
  Rat   385 WFPQLTETRAIMLSRSLAFAYGLVCLGMAYVSSHLGSVLQAALSIFGMVGGPLLGLFCLGMFFPC 449

  Fly   449 CNAKTAVTSIIVSVVAMVWI------------IANGQMNFKSGLIKYEVLPNSLDQCEARGLYMI 501
            .|...|:..::..:....||            .|:..:|..|..     ||::|           
  Rat   450 ANPLGAIVGLLTGLTMAFWIGIGSIVSRMSSAAASPPLNGSSSF-----LPSNL----------- 498

  Fly   502 AEAINKTDFTPVTMKPPSGAPVTTAFHSDRDFSLYDISFYWYKVLGSALVFLCAIPLSYIWRPDE 566
             .....|...|.|:..|:|..           ..|.:|:.||....|..|....:.:|.:.....
  Rat   499 -TVATVTTLMPSTLSKPTGLQ-----------QFYSLSYLWYSAHNSTTVIAVGLIVSLLTGGMR 551

  Fly   567 NEKQNPKLYSPFVRKFLS-LPVTDQ 590
            ....||....|.:.|.|: ||::.|
  Rat   552 GRSLNPGTIYPVLPKLLALLPLSCQ 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2187NP_001189331.1 SLC5sbd_NIS-SMVT 27..561 CDD:271383 174/553 (31%)
Slc5a6NP_570102.1 SLC5-6-like_sbd 23..548 CDD:382020 175/558 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489472at33208
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X112
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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