DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2187 and LOC100488353

DIOPT Version :9

Sequence 1:NP_001189331.1 Gene:CG2187 / 43743 FlyBaseID:FBgn0017448 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_002936886.2 Gene:LOC100488353 / 100488353 -ID:- Length:606 Species:Xenopus tropicalis


Alignment Length:555 Identity:193/555 - (34%)
Similarity:303/555 - (54%) Gaps:41/555 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FGLTDYFVFVIMLGASAGIGVYFGFFSKSKNTTEEYLRGGKKMQTLPIAISLVASQLSGIAIMSI 88
            |...||.||..:|..||.||:|:.|..:.|||::|:|.||:.|..||:|:||.||.:|.:.::..
 Frog    10 FSPWDYVVFAAVLLISAVIGIYYAFAGRRKNTSQEFLTGGRSMSALPVALSLTASFMSAVTVLGT 74

  Fly    89 PAESYTYG-------FNYIFVVLAMLVVIPILIYIIVPVFYENNVSNCYEYLEMRFNKRTRQLVT 146
            ||:.|.:|       |:|:|||:       |...|.:||||..|:::.|||||:||||..|.|.|
 Frog    75 PADVYRFGAIYSMFAFSYVFVVI-------ICAEIFLPVFYRLNITSTYEYLELRFNKCVRILGT 132

  Fly   147 FFFVTNSFLMLPVYMFIPSLAFAQVTGMNIHLINVMVSSICIFYTMLGGIKAVVWTDVVQGAIML 211
            ..|:....|...:.::.|:||..||:|.|:.........:|.||..|||||||:||||.|..||:
 Frog   133 VIFIIEMVLYTGIVIYAPALALNQVSGFNLWGAMTATGLVCTFYCTLGGIKAVIWTDVFQIVIMV 197

  Fly   212 LSVVAVGVLGTIRSGGMFTVMERASDGGRFNF-DFGLDPRIRMTFWGATMGGIFMWTGHIGLNQS 275
            ...:||.:.|.:..||:.|::..:..|||.|| ||...|..|.|||...:||.|:|.|..|:|||
 Frog   198 AGFIAVIIRGVVVQGGIQTIINDSYYGGRLNFWDFDPQPLRRHTFWTIVIGGTFLWVGIYGVNQS 262

  Fly   276 CVQRIVSLPSYSHAKKSLIVSGLGFLIISFFNTISGIIMFARYYGCDPMLAGLVSKPDKMMPFFV 340
            .|||.:|..:...||.||.::.:|.:||.....:.|:|:::.|..|||..:.::|.||::||:.|
 Frog   263 QVQRYISCKTKGQAKLSLYINLIGLMIILACAVLCGLILYSVYKDCDPWTSQIISAPDQLMPYLV 327

  Fly   341 QDIMGHLAGMPGVFISCVFSAALSSLSATLNSLAGVVYFDYIKPRIRHTEARANWAMKLIVVVMG 405
            .||:....|:||:|::|.:|..||::|:::|:||.|...|.|||....:|.:.:|..|.:..:.|
 Frog   328 LDILQGYPGVPGLFVACAYSGTLSTVSSSINALAAVTVEDLIKPYTHLSENKLSWISKGMSALYG 392

  Fly   406 GYCILGGFMVQNFNSILQTVVTITGINTGAVVGVFLLGMFVPRCNAKTAVTSIIVSVVAMVWIIA 470
            ..||....:.....|::|..::|..:..|.::|:|.||:|.|.||:..|:..::......:|...
 Frog   393 ILCIAMAAVASFMGSVIQAALSIFAMVGGPLLGLFSLGLFFPFCNSVGAIVGLLFGFSMSLWAGI 457

  Fly   471 NGQMNFKSGLIKYEVLPNSLDQCEARGLYMIAEAIN----KTDFTPVTMKPPSGAPVTTAFHSD- 530
            ..|:        |..||.     .:|.|.:.....|    .|::|.:|.: |:.|.||.....| 
 Frog   458 GAQI--------YPPLPE-----RSRPLPLSIAGCNFSTMDTNWTSMTTE-PTMAMVTNLIPLDT 508

  Fly   531 ------RDFSLYDISFYWYKVLGSALVFLCAIPLS 559
                  .|: .|.:|:.::..||:.:..|..:.:|
 Frog   509 SERPVLADY-WYSLSYLYFSTLGTIVTILVGVIVS 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2187NP_001189331.1 SLC5sbd_NIS-SMVT 27..561 CDD:271383 192/552 (35%)
LOC100488353XP_002936886.2 SLC5-6-like_sbd 10..550 CDD:382020 193/555 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489472at33208
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR42985
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.020

Return to query results.
Submit another query.