DRSC/TRiP Functional Genomics Resources

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Protein Alignment salt and Smvt

DIOPT Version :10

Sequence 1:NP_651889.3 Gene:salt / 43742 FlyBaseID:FBgn0039872 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster


Alignment Length:610 Identity:310/610 - (50%)
Similarity:419/610 - (68%) Gaps:31/610 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VSNLASTVATATTATL---EDLHFSLTDYIVFSLMLSASAGIGVYFGFFSKAKNTTEEYLQGGKR 66
            :|:|.:....||.||:   ....|:.|||.||:|:||.||.||||||||:|.::||||||.||||
  Fly     1 MSSLLNATVLATAATVVPDSQFVFNATDYGVFALVLSISAAIGVYFGFFAKGEDTTEEYLMGGKR 65

  Fly    67 MPTLPVAISLVSSQLSGVAMMSVPAETYSFGFNMIFVVWAMVLSVPVLIYIIVPVFYDNNVSNCY 131
            |.|:|:|||||:||||.:::|::|||.|::|.|.:|.|..|||.||:|.|:::||||:||::|||
  Fly    66 MKTIPIAISLVASQLSAISIMTIPAEMYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCY 130

  Fly   132 EYLELRFSKRTRQLVTITFILNQFLMLPVYMFVPSLAFSQVTGYNIHLINTVVSSICVFYTMLGG 196
            ||||:||.::.|.|.|..|||..|.|||:::|:|||||:||||:|:|||||||.||||||||.||
  Fly   131 EYLEMRFCRKVRVLQTFIFILTMFFMLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGG 195

  Fly   197 IKAVVWTDVVQGSVMLISVVLVAILGTSNTGGITNVLENAAEGGRFDFSFGIDPRLRLTFISGMA 261
            |||||||||:|.::|:.|||||.:||....||...||..|.||||.|.::..|...|.|..:...
  Fly   196 IKAVVWTDVIQAAIMVASVVLVGVLGAHRVGGFFEVLRIAGEGGRLDINYNFDLTTRSTIWNIFT 260

  Fly   262 SGLLMWTGKLGLDQSCVQRIVSLPSYGHAKRCLLMAGVGFLLIMSFTCFTGIIMFAYYYGCDPIQ 326
            |..:||||.:||:||||||||||||.|||:|.|::.|.||:|||.|.|||||::::.::.|||||
  Fly   261 SATMMWTGYVGLNQSCVQRIVSLPSLGHARRSLVLFGFGFILIMFFNCFTGIVIYSRFHDCDPIQ 325

  Fly   327 AGLVSKPDKLMPFFIQDIMGHMMGMPGVFISCVFSASLSSLSASLNSFAGVVYFDYIKPRINHSE 391
            :|.|||.||::|:|:||.:|::.|||||||||||||:||:||||:||..||||||||||.|.|:|
  Fly   326 SGHVSKVDKMVPYFVQDTVGNLWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIKPHIRHTE 390

  Fly   392 AKANATMKLVIVVMGAYCIVGGFIVQNFNSIIQTMWTITGINMGAVVGVFCLGMFVPRCNAKVAV 456
            .:||..|||.:...|.|||:||.:::|||||:|.:::|.|::.|:..|||.|||.||:.:.:.|:
  Fly   391 HRANVIMKLFVFFTGIYCILGGMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAAL 455

  Fly   457 SGIAFSCLVMLWIIINGQMNFKAGLIKYDPLPNGLDQCEAKGFEVILNAIRNKNVTNVGTTAIP- 520
            .|:..|...|..|:|     ...|...||.||.....|.|.         .|..:.:: :||.| 
  Fly   456 VGVLASIACMATIVI-----LSWGRNHYDTLPTSTSACPAS---------LNGTIKDI-STASPL 505

  Fly   521 ----SLEAPKELTTAFDSNRDFSIYDTSFYWYKVLGALLVFAWAIPMSYVWPLDKEEKQNPKLYS 581
                :.|||.       ..::|||.|.||.||.|.|.::.:...||:||:.....:.|.||||.|
  Fly   506 FLGSTTEAPV-------GEKEFSILDLSFNWYTVTGFVITWLIGIPLSYILKSGPDYKPNPKLLS 563

  Fly   582 PFVRSMLN-KPSPVLELEELPLKTP 605
            |.|:..:: |.:|..|..:|.|:.|
  Fly   564 PVVQPFVHYKLTPSDEPHQLNLEKP 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saltNP_651889.3 SLC5sbd_NIS-SMVT 28..566 CDD:271383 288/542 (53%)
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 288/542 (53%)

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