DRSC/TRiP Functional Genomics Resources

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Protein Alignment salt and rumpel

DIOPT Version :10

Sequence 1:NP_651889.3 Gene:salt / 43742 FlyBaseID:FBgn0039872 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_572397.1 Gene:rumpel / 31674 FlyBaseID:FBgn0029950 Length:601 Species:Drosophila melanogaster


Alignment Length:602 Identity:193/602 - (32%)
Similarity:323/602 - (53%) Gaps:57/602 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LEDLHFSL-----TDYIVFSLMLSASAGIGVYF-------------GFFSKAKNTTEEYLQGGKR 66
            :|:|..||     .||:||.|||:..|.||:||             ....:|.::...||.||::
  Fly     3 VEELRASLQSFGWPDYLVFCLMLAICAVIGIYFCLQLRLESRKQKANGSEEAASSAASYLVGGRQ 67

  Fly    67 MPTLPVAISLVSSQLSGVAMMSVPAETYSFGFNMIFVVWAMVLSVPVLIYIIVPVFYDNNVSNCY 131
            |...|:.:||:||.:||:.::..|.|.|.:|...::::.::||....:.|..:|||::.|:.:.|
  Fly    68 MKIFPITMSLISSFISGITLLGTPTEVYLYGAQYMYIMGSLVLMGFCMYYFFLPVFHELNLISTY 132

  Fly   132 EYLELRFSKRTRQLVTITFILNQFLMLPVYMFVPSLAFSQVTGYNIHLINTVVSSICVFYTMLGG 196
            :|||.|:::..|...::.||:...|.||:.::||::||:|.||.|||::..:|..:|:|||.:||
  Fly   133 KYLEQRYNRSLRLFGSVMFIVASLLWLPIVIYVPAIAFNQATGVNIHIVTPIVCVVCIFYTCIGG 197

  Fly   197 IKAVVWTDVVQGSVMLISVVLVAILGTSNTGGITNVLENAAEGGRFDF-SFGIDPRLRLTFISGM 260
            :||||||||:|..:|..::.||.|.||.:.||...|.:.|.|..|.:. :|..|...|.||.|.:
  Fly   198 LKAVVWTDVIQTLIMFGAMALVLIKGTLDIGGPGVVWQKAQETARLEVPNFSADLSERYTFYSLV 262

  Fly   261 ASGLLMWTGKLGLDQSCVQRIVSLPSYGHAKRCL--LMAGV-GFLLIMSFTCFTGIIMFAYYYGC 322
            ..|:..|.....:.|:.:||.:|||:...|:..:  .:||| .||:|..   :||::::|.|..|
  Fly   263 LGGVAHWLKSNAISQNMIQRYLSLPTLRDARIAIWTFIAGVLAFLMICG---YTGLLIYATYSQC 324

  Fly   323 DPIQAGLVSKPDKLMPFFIQDIMGHMMGMPGVFISCVFSASLSSLSASLNSFAGVVYFDYIKP-- 385
            ||::..|..:.|:|:|..:.|.:|...|:||||::.||||:|||||..|||.:.||..|::|.  
  Fly   325 DPLETKLAQRNDQLLPLLVMDTLGSYPGLPGVFVAGVFSAALSSLSTGLNSLSAVVLEDFVKTFR 389

  Fly   386 RINHSEAKANATMKLVIVVMGAYCIVGGFIVQNFNSIIQTMWTITGINMGAVVGVFCLGMFVPRC 450
            :...:|.:....|:.|:||.|...:...|.|:...:::|...|::.:..|.::|:|..|:.:|..
  Fly   390 KSPLTEGQTAFVMRSVVVVFGIIFVALVFAVEKLGAVLQLTITLSSVANGPLLGIFTAGVMLPWV 454

  Fly   451 NAKVAVSGIAFSCLVMLWIIINGQMNFKAGLIKYDPLPNGLDQCEAKGFEVILNAIRNKNVTNVG 515
            |:|.|:.|...|.:||.|:.::.|.:...|.:.|...|.....|               |.|..|
  Fly   455 NSKGALLGGFSSLIVMAWMCVSAQRDLVTGDLVYKRKPYSTMGC---------------NYTFAG 504

  Fly   516 TTAIPSLEAPKELTT-AFDS------NRDFSIYDTSFYWYKVLGALLVFAWAIPMSYVWPLDKEE 573
                    .|:|..: |.|.      :..|.:|..|:.::.:.|||:....|:..|.:......:
  Fly   505 --------EPREFASLALDGAISSVPSAPFQLYRISYLYFTLFGALVTIVVALVTSLLLRETDLD 561

  Fly   574 KQNPKLYSPFVRSMLNK 590
            ..:.:|.:||||..|.:
  Fly   562 GVDTRLLTPFVRRWLER 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saltNP_651889.3 SLC5sbd_NIS-SMVT 28..566 CDD:271383 183/563 (33%)
rumpelNP_572397.1 SLC5sbd_NIS-SMVT 16..554 CDD:271383 183/563 (33%)

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