DRSC/TRiP Functional Genomics Resources

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Protein Alignment salt and smvt-1

DIOPT Version :10

Sequence 1:NP_651889.3 Gene:salt / 43742 FlyBaseID:FBgn0039872 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001360058.2 Gene:smvt-1 / 186132 WormBaseID:WBGene00018716 Length:565 Species:Caenorhabditis elegans


Alignment Length:605 Identity:156/605 - (25%)
Similarity:274/605 - (45%) Gaps:81/605 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LHFSLTDYI-VFSLMLSASAGIGVYFGFFSKAKNTTEEY----LQGGKRMPTLPVAISLVSSQLS 82
            :.||  ||: :.:.::|.||     :||....|...||.    ...|.|:......:|:.|..:|
 Worm     1 MEFS--DYVTLLTCLISISA-----YGFIKSRKTENEEQSVHATMVGSRVSVWSATLSVCSGFIS 58

  Fly    83 GVAMMSVPAETYSFGFNMIFVVWAMVLSVPVLIYIIVPVFYDNNVSNCYEYLELRFSKRTRQLVT 147
            .::::..|||.|..|..|::.....|:|.|::.::.:||.|...::..|||.|.||..:.|.:.|
 Worm    59 SISLLGFPAEIYYQGGMMLWFAPMYVISFPIVAFVFLPVLYRLKLTTIYEYFERRFDYKCRFVTT 123

  Fly   148 ITFILNQFLMLPVYMFVPSLAFSQVTGYNIHLINTVVSSICVFYTMLGGIKAVVWTDVVQGSVML 212
            ..|.:...|...|.::.||||.:.:|...|.:...:.:.:..||..:||:||.:.|..:|  ::|
 Worm   124 SLFCVQMILYNSVALYAPSLAIASITNIPITVSILITAVLSAFYISVGGVKAGIHTSAIQ--MLL 186

  Fly   213 ISVVLVAILGTS-NTGGITNVLENAAEGGRFDFS-FGIDPRLRLTFISGMASGLLMWTGKL---- 271
            |.:.:..|:..| ....|.:|..:...|.||..: |.|:|.:|.:..|.:..|    ||.:    
 Worm   187 IFLTMTFIISISLREMSIHDVYTSVVHGKRFILNDFRINPTIRHSVWSLLIGG----TGNILALF 247

  Fly   272 GLDQSCVQRIVSLPSYGHAKRCLLMAGVGFLLIMSFTCFTGIIMFAYYYGCDPIQAGLVSKPDKL 336
            ..:|..:||.:::.:...|::.:|:..|...:|:......|.:::|:|..|.|    .:...::|
 Worm   248 AANQLSIQRYMAMDTLKSAQKVVLLNIVCNTIILVSYVSVGFLIYAHYKDCHP----QIGNANEL 308

  Fly   337 MPFFIQDIMGHMMGMPGVFISCVFSASLSSLSASLNSFAGVVYFDYIK---------PRINHSEA 392
            :|.|:.|:.....|..|:|.:.|:||.:|:||||..:.:.:|..|..|         |..|....
 Worm   309 LPRFVMDVTSKYPGSVGLFAAAVYSAGISTLSASFTAVSSIVINDVWKVYRERRKMAPLRNDQVQ 373

  Fly   393 KANATMKLVIVVMGAYCIVGGFIVQNFNSII-QTMWTITGINMGAVVGVFCLGMFVPRCNAKVAV 456
            .|   |:::.:|:....|...|:.....||| |..:.:.|...|.|:|.|.:|:||||...|.|:
 Worm   374 NA---MRILPIVLSFISIFVAFLCSMLQSIILQVSFIVFGAGGGPVLGSFVVGLFVPRVKEKAAL 435

  Fly   457 SGIAFSCLVMLWIIINGQMNFKAGLIKYDPLPNGLDQCEAKGFEVILNAIRNKNVTNVGTTAIPS 521
            .|:..|.:|...|.|.      :.|:|..|:...|.||.            |:.:|....:.|.:
 Worm   436 VGLIGSIIVCFSISIG------SVLVKVKPVALELGQCS------------NQTLTYFDESFIGA 482

  Fly   522 LEAPKELTTAFDSNRDFSIYDTSFYWYKVLGALLVFAWAIPMSYVW----------PLDKEEKQN 576
            :.:   ....|...|.|:|   |:.:|.::..:...|.:|.|..::          |:..|    
 Worm   483 VTS---TPLVFGLERIFAI---SYQYYSIIAVVTNVALSIVMQKLFELCSLTANHLPVSHE---- 537

  Fly   577 PKLYSPFVRSMLNKPSPVLE 596
              |.||.:....:|..|.||
 Worm   538 --LVSPLLTYSSSKRDPELE 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
saltNP_651889.3 SLC5sbd_NIS-SMVT 28..566 CDD:271383 145/558 (26%)
smvt-1NP_001360058.2 SLC5sbd_NIS-SMVT 5..521 CDD:271383 145/557 (26%)

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