DRSC/TRiP Functional Genomics Resources

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Protein Alignment nero and AT3G62530

DIOPT Version :10

Sequence 1:NP_651887.1 Gene:nero / 43740 FlyBaseID:FBgn0261479 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_567129.1 Gene:AT3G62530 / 825427 AraportID:AT3G62530 Length:221 Species:Arabidopsis thaliana


Alignment Length:152 Identity:51/152 - (33%)
Similarity:82/152 - (53%) Gaps:1/152 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 VDDSNPYASVDPSPPTAGDKSVTELKAIYLDAQQSLFDRYRAMFSLRNLRTEESVLAIAEGLKDS 202
            :|.|.| |.....|..|...|:..::...|:..:..:.|..|:|:|||...|:::..|.|.|...
plant    67 IDSSAP-AESKAYPKAANISSIHSMRESLLEETEEDYYRRLALFALRNHGGEDAINVIIESLGVE 130

  Fly   203 SALFRHEVAFVLGQLQEPCSIPFLQENLEDRLENEMVRHECAEALGAIATEDCIQILNRYAEDDK 267
            |::.|.|.|||||||:...:|..|.:.|.|..|:.|||.|.|:|||.||.|...::|...:.|..
plant   131 SSMIRIEAAFVLGQLESKTAIASLSKILRDVKEHPMVRVEAAKALGFIADEKSREVLQELSGDLD 195

  Fly   268 RVVKESCVIALDMCEYENSPEF 289
            .::.:.|..:|.:.|::||.::
plant   196 PIIAKGCDSSLSILEFKNSKKY 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neroNP_651887.1 HEAT <24..130 CDD:441023
HEAT repeat 39..67 CDD:293787
HEAT repeat 69..99 CDD:293787
HEAT repeat 102..127 CDD:293787
HEAT <176..278 CDD:441023 39/101 (39%)
HEAT repeat 223..252 CDD:293787 14/28 (50%)
HEAT repeat 254..280 CDD:293787 4/25 (16%)
AT3G62530NP_567129.1 HEAT 104..>198 CDD:441023 38/93 (41%)
HEAT repeat 119..145 CDD:293787 11/25 (44%)
HEAT repeat 149..181 CDD:293787 15/31 (48%)
Blue background indicates that the domain is not in the aligned region.

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