DRSC/TRiP Functional Genomics Resources

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Protein Alignment nero and AT3G62530

DIOPT Version :9

Sequence 1:NP_651887.1 Gene:nero / 43740 FlyBaseID:FBgn0261479 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_567129.1 Gene:AT3G62530 / 825427 AraportID:AT3G62530 Length:221 Species:Arabidopsis thaliana


Alignment Length:152 Identity:51/152 - (33%)
Similarity:82/152 - (53%) Gaps:1/152 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 VDDSNPYASVDPSPPTAGDKSVTELKAIYLDAQQSLFDRYRAMFSLRNLRTEESVLAIAEGLKDS 202
            :|.|.| |.....|..|...|:..::...|:..:..:.|..|:|:|||...|:::..|.|.|...
plant    67 IDSSAP-AESKAYPKAANISSIHSMRESLLEETEEDYYRRLALFALRNHGGEDAINVIIESLGVE 130

  Fly   203 SALFRHEVAFVLGQLQEPCSIPFLQENLEDRLENEMVRHECAEALGAIATEDCIQILNRYAEDDK 267
            |::.|.|.|||||||:...:|..|.:.|.|..|:.|||.|.|:|||.||.|...::|...:.|..
plant   131 SSMIRIEAAFVLGQLESKTAIASLSKILRDVKEHPMVRVEAAKALGFIADEKSREVLQELSGDLD 195

  Fly   268 RVVKESCVIALDMCEYENSPEF 289
            .::.:.|..:|.:.|::||.::
plant   196 PIIAKGCDSSLSILEFKNSKKY 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neroNP_651887.1 HEAT repeat 39..67 CDD:293787
HEAT_2 43..126 CDD:290374
EZ_HEAT 52..81 CDD:128837
HEAT repeat 69..99 CDD:293787
EZ_HEAT 85..114 CDD:128837
HEAT repeat 102..127 CDD:293787
EZ_HEAT 173..202 CDD:128837 10/28 (36%)
HEAT_2 199..278 CDD:290374 30/78 (38%)
EZ_HEAT 204..232 CDD:128837 12/27 (44%)
HEAT repeat 223..252 CDD:293787 14/28 (50%)
EZ_HEAT 237..266 CDD:128837 12/28 (43%)
HEAT repeat 254..280 CDD:293787 4/25 (16%)
AT3G62530NP_567129.1 HEAT_2 93..176 CDD:290374 32/82 (39%)
EZ_HEAT 102..130 CDD:128837 10/27 (37%)
HEAT repeat 119..145 CDD:293787 11/25 (44%)
EZ_HEAT 133..160 CDD:128837 12/26 (46%)
HEAT repeat 149..181 CDD:293787 15/31 (48%)
HEAT_2 151..>209 CDD:290374 20/57 (35%)
EZ_HEAT 165..193 CDD:128837 12/27 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1413
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1441854at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12697
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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