DRSC/TRiP Functional Genomics Resources

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Protein Alignment nero and dohh

DIOPT Version :10

Sequence 1:NP_651887.1 Gene:nero / 43740 FlyBaseID:FBgn0261479 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_955857.1 Gene:dohh / 321732 ZFINID:ZDB-GENE-030131-451 Length:305 Species:Danio rerio


Alignment Length:304 Identity:189/304 - (62%)
Similarity:231/304 - (75%) Gaps:5/304 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVSQQQIEAIGGVLNNKERPLKERFRALFTLKNIGGGAAIEAISKAFDDDSALLKHELAYCLGQM 65
            |.:.:.|.|:|.:|.|.::.|..||||||||:|:||..|::.||:||.|:|||||||||||||||
Zfish     1 MANDKDIAAVGSILVNTKQDLTTRFRALFTLRNLGGAEAVKWISEAFVDESALLKHELAYCLGQM 65

  Fly    66 QDAQALDILTKVLKDTTQEPMVRHEAAEAMGAIGHPDVLPILEEYKQDPVVEVAETCAIALDRVR 130
            ||..|:..|..|||||.|||||||||.||:||||:|.||.:|::|.:|||:||||||.:|:.|:.
Zfish    66 QDESAIPTLEAVLKDTNQEPMVRHEAGEALGAIGNPKVLELLKKYAEDPVIEVAETCQLAVKRLE 130

  Fly   131 WLQSG--QKVD--DSNPYASVDPSPPTAGDKSVTELKAIYLDAQQSLFDRYRAMFSLRNLRTEES 191
            ||.:|  |..|  |.|||.||||:|| |..|||.||:...||....|||||||||:||||.|||:
Zfish   131 WLMNGGEQTKDGTDENPYCSVDPAPP-AQRKSVPELRTQLLDETLPLFDRYRAMFALRNLGTEEA 194

  Fly   192 VLAIAEGLKDSSALFRHEVAFVLGQLQEPCSIPFLQENLEDRLENEMVRHECAEALGAIATEDCI 256
            |||:.:||:.||||||||:.:||||:|...|||.||..||...||.|||||||||||:|..|.|:
Zfish   195 VLALGDGLQCSSALFRHEIGYVLGQIQHEASIPQLQAALEKMDENAMVRHECAEALGSIGKEPCV 259

  Fly   257 QILNRYAEDDKRVVKESCVIALDMCEYENSPEFQYADGLAKLDA 300
            |||.||.:|.:|||||||.:||||.|||||.:|||||||.:|.:
Zfish   260 QILERYRKDQERVVKESCEVALDMLEYENSSQFQYADGLLRLQS 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neroNP_651887.1 HEAT <24..130 CDD:441023 72/105 (69%)
HEAT repeat 39..67 CDD:293787 21/27 (78%)
HEAT repeat 69..99 CDD:293787 20/29 (69%)
HEAT repeat 102..127 CDD:293787 14/24 (58%)
HEAT <176..278 CDD:441023 67/101 (66%)
HEAT repeat 223..252 CDD:293787 20/28 (71%)
HEAT repeat 254..280 CDD:293787 16/25 (64%)
dohhNP_955857.1 HEAT <20..129 CDD:441023 72/108 (67%)
HEAT-like PBS-type 1 54..80 18/25 (72%)
HEAT-like PBS-type 2 87..113 16/25 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 137..160 13/23 (57%)
HEAT 159..281 CDD:441023 77/121 (64%)
HEAT-like PBS-type 3 178..204 19/25 (76%)
HEAT-like PBS-type 4 209..235 15/25 (60%)
HEAT-like PBS-type 5 242..268 18/25 (72%)
HEAT repeat 257..283 CDD:293787 16/25 (64%)

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