DRSC/TRiP Functional Genomics Resources

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Protein Alignment nero and Dohh

DIOPT Version :9

Sequence 1:NP_651887.1 Gene:nero / 43740 FlyBaseID:FBgn0261479 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001020177.1 Gene:Dohh / 314644 RGDID:1304783 Length:302 Species:Rattus norvegicus


Alignment Length:300 Identity:174/300 - (57%)
Similarity:218/300 - (72%) Gaps:4/300 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVSQQQIEAIGGVLNNKERPLKERFRALFTLKNIGGGAAIEAISKAFDDDSALLKHELAYCLGQM 65
            ||::|::||||..|.:..:||:.||||||||:.:||..||..||:.|:|.|||||||||||||||
  Rat     1 MVTEQEVEAIGKTLVDSTQPLQARFRALFTLRGLGGPDAISWISRGFEDSSALLKHELAYCLGQM 65

  Fly    66 QDAQALDILTKVLKDTTQEPMVRHEAAEAMGAIGHPDVLPILEEYKQDPVVEVAETCAIALDRVR 130
            :|.:|:.:|..||:|..|||||||||.||:||||:|.||.:|::|..||||||||||.:|:.|:.
  Rat    66 RDPRAIPVLVSVLQDRNQEPMVRHEAGEALGAIGNPKVLGLLKQYSTDPVVEVAETCQLAVRRLE 130

  Fly   131 WLQSGQ-KVDDSNPYASVDPSPPTA-GDKSVTELKAIYLDAQQSLFDRYRAMFSLRNLRTEESVL 193
            |||... :...:.||.||||:||.| ||  |..|:...||..|.||:||||||:|||:..:|:.|
  Rat   131 WLQQHPGEATCAGPYLSVDPAPPAAEGD--VGRLRETLLDEAQPLFERYRAMFALRNVGGKEAAL 193

  Fly   194 AIAEGLKDSSALFRHEVAFVLGQLQEPCSIPFLQENLEDRLENEMVRHECAEALGAIATEDCIQI 258
            |:|||||..||||||||.:||||||...::..|...|....|:.||||||||||||||...|:..
  Rat   194 ALAEGLKCGSALFRHEVGYVLGQLQHEAAVSELAATLARTTESPMVRHECAEALGAIARPACLAA 258

  Fly   259 LNRYAEDDKRVVKESCVIALDMCEYENSPEFQYADGLAKL 298
            |..|..|.:|||:|||.:||||.||||..:|||||||.:|
  Rat   259 LREYITDPERVVRESCEVALDMYEYENGQDFQYADGLERL 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neroNP_651887.1 HEAT repeat 39..67 CDD:293787 21/27 (78%)
HEAT_2 43..126 CDD:290374 55/82 (67%)
EZ_HEAT 52..81 CDD:128837 19/28 (68%)
HEAT repeat 69..99 CDD:293787 18/29 (62%)
EZ_HEAT 85..114 CDD:128837 18/28 (64%)
HEAT repeat 102..127 CDD:293787 15/24 (63%)
EZ_HEAT 173..202 CDD:128837 19/28 (68%)
HEAT_2 199..278 CDD:290374 43/78 (55%)
EZ_HEAT 204..232 CDD:128837 15/27 (56%)
HEAT repeat 223..252 CDD:293787 16/28 (57%)
EZ_HEAT 237..266 CDD:128837 17/28 (61%)
HEAT repeat 254..280 CDD:293787 12/25 (48%)
DohhNP_001020177.1 HEAT_2 7..96 CDD:290374 55/88 (63%)
HEAT repeat 39..67 CDD:293787 21/27 (78%)
EZ_HEAT 52..80 CDD:128837 19/27 (70%)
HEAT-like PBS-type 1 54..80 17/25 (68%)
HEAT repeat 69..99 CDD:293787 18/29 (62%)
EZ_HEAT 85..114 CDD:128837 18/28 (64%)
HEAT-like PBS-type 2 87..113 16/25 (64%)
HEAT_2 162..248 CDD:290374 49/85 (58%)
HEAT-like PBS-type 3 175..201 16/25 (64%)
HEAT-like PBS-type 4 206..232 13/25 (52%)
HEAT_2 230..>278 CDD:290374 26/47 (55%)
EZ_HEAT 237..266 CDD:128837 17/28 (61%)
HEAT-like PBS-type 5 239..265 16/25 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 103 1.000 Domainoid score I6657
eggNOG 1 0.900 - - E1_COG1413
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6290
Inparanoid 1 1.050 333 1.000 Inparanoid score I2330
OMA 1 1.010 - - QHG53932
OrthoDB 1 1.010 - - D1441854at2759
OrthoFinder 1 1.000 - - FOG0004875
OrthoInspector 1 1.000 - - oto97683
orthoMCL 1 0.900 - - OOG6_101312
Panther 1 1.100 - - LDO PTHR12697
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3438
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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