DRSC/TRiP Functional Genomics Resources

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Protein Alignment nero and Dohh

DIOPT Version :10

Sequence 1:NP_651887.1 Gene:nero / 43740 FlyBaseID:FBgn0261479 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001020177.1 Gene:Dohh / 314644 RGDID:1304783 Length:302 Species:Rattus norvegicus


Alignment Length:300 Identity:174/300 - (57%)
Similarity:218/300 - (72%) Gaps:4/300 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVSQQQIEAIGGVLNNKERPLKERFRALFTLKNIGGGAAIEAISKAFDDDSALLKHELAYCLGQM 65
            ||::|::||||..|.:..:||:.||||||||:.:||..||..||:.|:|.|||||||||||||||
  Rat     1 MVTEQEVEAIGKTLVDSTQPLQARFRALFTLRGLGGPDAISWISRGFEDSSALLKHELAYCLGQM 65

  Fly    66 QDAQALDILTKVLKDTTQEPMVRHEAAEAMGAIGHPDVLPILEEYKQDPVVEVAETCAIALDRVR 130
            :|.:|:.:|..||:|..|||||||||.||:||||:|.||.:|::|..||||||||||.:|:.|:.
  Rat    66 RDPRAIPVLVSVLQDRNQEPMVRHEAGEALGAIGNPKVLGLLKQYSTDPVVEVAETCQLAVRRLE 130

  Fly   131 WLQSGQ-KVDDSNPYASVDPSPPTA-GDKSVTELKAIYLDAQQSLFDRYRAMFSLRNLRTEESVL 193
            |||... :...:.||.||||:||.| ||  |..|:...||..|.||:||||||:|||:..:|:.|
  Rat   131 WLQQHPGEATCAGPYLSVDPAPPAAEGD--VGRLRETLLDEAQPLFERYRAMFALRNVGGKEAAL 193

  Fly   194 AIAEGLKDSSALFRHEVAFVLGQLQEPCSIPFLQENLEDRLENEMVRHECAEALGAIATEDCIQI 258
            |:|||||..||||||||.:||||||...::..|...|....|:.||||||||||||||...|:..
  Rat   194 ALAEGLKCGSALFRHEVGYVLGQLQHEAAVSELAATLARTTESPMVRHECAEALGAIARPACLAA 258

  Fly   259 LNRYAEDDKRVVKESCVIALDMCEYENSPEFQYADGLAKL 298
            |..|..|.:|||:|||.:||||.||||..:|||||||.:|
  Rat   259 LREYITDPERVVRESCEVALDMYEYENGQDFQYADGLERL 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neroNP_651887.1 HEAT <24..130 CDD:441023 69/105 (66%)
HEAT repeat 39..67 CDD:293787 21/27 (78%)
HEAT repeat 69..99 CDD:293787 18/29 (62%)
HEAT repeat 102..127 CDD:293787 15/24 (63%)
HEAT <176..278 CDD:441023 58/101 (57%)
HEAT repeat 223..252 CDD:293787 16/28 (57%)
HEAT repeat 254..280 CDD:293787 12/25 (48%)
DohhNP_001020177.1 HEAT <24..129 CDD:441023 68/104 (65%)
HEAT repeat 39..67 CDD:293787 21/27 (78%)
HEAT-like PBS-type 1 54..80 17/25 (68%)
HEAT repeat 69..99 CDD:293787 18/29 (62%)
HEAT-like PBS-type 2 87..113 16/25 (64%)
HEAT-like PBS-type 3 175..201 16/25 (64%)
HEAT <176..278 CDD:441023 58/101 (57%)
HEAT-like PBS-type 4 206..232 13/25 (52%)
HEAT-like PBS-type 5 239..265 16/25 (64%)

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