DRSC/TRiP Functional Genomics Resources

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Protein Alignment nero and Dohh

DIOPT Version :9

Sequence 1:NP_651887.1 Gene:nero / 43740 FlyBaseID:FBgn0261479 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_598725.2 Gene:Dohh / 102115 MGIID:1915964 Length:302 Species:Mus musculus


Alignment Length:299 Identity:173/299 - (57%)
Similarity:226/299 - (75%) Gaps:2/299 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVSQQQIEAIGGVLNNKERPLKERFRALFTLKNIGGGAAIEAISKAFDDDSALLKHELAYCLGQM 65
            ||::|:|||||..|.:.::||:.||||||||:.:||..||..||:.|:|.|||||||||||||||
Mouse     1 MVTEQEIEAIGKTLVDPKQPLQARFRALFTLRGLGGPDAISWISRGFEDSSALLKHELAYCLGQM 65

  Fly    66 QDAQALDILTKVLKDTTQEPMVRHEAAEAMGAIGHPDVLPILEEYKQDPVVEVAETCAIALDRVR 130
            :||:|:.:|..||:||:|||||||||.||:||||:|:||.:|::|..||||||||||.:|:.|:.
Mouse    66 RDARAIPVLADVLQDTSQEPMVRHEAGEALGAIGNPEVLGLLKQYSTDPVVEVAETCQLAVGRLE 130

  Fly   131 WLQSGQ-KVDDSNPYASVDPSPPTAGDKSVTELKAIYLDAQQSLFDRYRAMFSLRNLRTEESVLA 194
            |||... :...:.||.||||:|| |.::.|..|:...||..:.||:||||||:|||:..:|:.||
Mouse   131 WLQQHPGEATCAGPYLSVDPAPP-AAEQDVGRLREALLDEARPLFERYRAMFALRNVGGKEAALA 194

  Fly   195 IAEGLKDSSALFRHEVAFVLGQLQEPCSIPFLQENLEDRLENEMVRHECAEALGAIATEDCIQIL 259
            :||||:..||||||||.:||||||...::|.|...|....|:.||||||||||||||...|:..|
Mouse   195 LAEGLQCGSALFRHEVGYVLGQLQHEAAVPGLAATLARTTESPMVRHECAEALGAIARPACLAAL 259

  Fly   260 NRYAEDDKRVVKESCVIALDMCEYENSPEFQYADGLAKL 298
            ..:.||.::||:|||.:||||.|||:|.:|||||||.:|
Mouse   260 REHIEDPEQVVRESCEVALDMYEYESSQDFQYADGLERL 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neroNP_651887.1 HEAT repeat 39..67 CDD:293787 21/27 (78%)
HEAT_2 43..126 CDD:290374 57/82 (70%)
EZ_HEAT 52..81 CDD:128837 20/28 (71%)
HEAT repeat 69..99 CDD:293787 19/29 (66%)
EZ_HEAT 85..114 CDD:128837 18/28 (64%)
HEAT repeat 102..127 CDD:293787 15/24 (63%)
EZ_HEAT 173..202 CDD:128837 18/28 (64%)
HEAT_2 199..278 CDD:290374 42/78 (54%)
EZ_HEAT 204..232 CDD:128837 16/27 (59%)
HEAT repeat 223..252 CDD:293787 17/28 (61%)
EZ_HEAT 237..266 CDD:128837 17/28 (61%)
HEAT repeat 254..280 CDD:293787 11/25 (44%)
DohhNP_598725.2 HEAT 37..292 CDD:224331 146/255 (57%)
HEAT repeat 39..67 CDD:293787 21/27 (78%)
HEAT-like PBS-type 1 54..80 18/25 (72%)
HEAT repeat 69..99 CDD:293787 19/29 (66%)
HEAT-like PBS-type 2 87..113 16/25 (64%)
HEAT-like PBS-type 3 175..201 16/25 (64%)
HEAT-like PBS-type 4 206..232 14/25 (56%)
HEAT-like PBS-type 5 239..265 15/25 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 109 1.000 Domainoid score I6417
eggNOG 1 0.900 - - E1_COG1413
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6290
Inparanoid 1 1.050 339 1.000 Inparanoid score I2350
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53932
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004875
OrthoInspector 1 1.000 - - oto94160
orthoMCL 1 0.900 - - OOG6_101312
Panther 1 1.100 - - LDO PTHR12697
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R329
SonicParanoid 1 1.000 - - X3438
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.860

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